Protein–RNA interactions for Protein: P04632

CAPNS1, Calpain small subunit 1, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1P04632 SSH2-211ENST00000590153 570 ntTSL 4 BASIC16.2■□□□□ 0.18
CAPNS1P04632 AL132655.2-201ENST00000596276 594 ntBASIC16.2■□□□□ 0.18
CAPNS1P04632 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CAPNS1P04632 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC16.2■□□□□ 0.18
CAPNS1P04632 AL590560.3-201ENST00000623350 461 ntBASIC16.2■□□□□ 0.18
CAPNS1P04632 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CAPNS1P04632 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CAPNS1P04632 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CAPNS1P04632 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
CAPNS1P04632 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
CAPNS1P04632 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC16.2■□□□□ 0.18
CAPNS1P04632 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CAPNS1P04632 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC16.2■□□□□ 0.18
CAPNS1P04632 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC16.19■□□□□ 0.18
CAPNS1P04632 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
CAPNS1P04632 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CAPNS1P04632 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC16.19■□□□□ 0.18
CAPNS1P04632 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
CAPNS1P04632 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC16.19■□□□□ 0.18
CAPNS1P04632 HLA-DQB2-231ENST00000435145 2026 ntBASIC16.19■□□□□ 0.18
CAPNS1P04632 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CAPNS1P04632 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CAPNS1P04632 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CAPNS1P04632 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC16.19■□□□□ 0.18
CAPNS1P04632 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CAPNS1P04632 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CAPNS1P04632 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
CAPNS1P04632 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CAPNS1P04632 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CAPNS1P04632 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
CAPNS1P04632 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
CAPNS1P04632 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
CAPNS1P04632 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CAPNS1P04632 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC16.19■□□□□ 0.18
CAPNS1P04632 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC16.19■□□□□ 0.18
CAPNS1P04632 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC16.19■□□□□ 0.18
CAPNS1P04632 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC16.19■□□□□ 0.18
CAPNS1P04632 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC16.19■□□□□ 0.18
CAPNS1P04632 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC16.19■□□□□ 0.18
CAPNS1P04632 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CAPNS1P04632 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC16.19■□□□□ 0.18
CAPNS1P04632 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CAPNS1P04632 AL645728.2-201ENST00000641974 660 ntBASIC16.19■□□□□ 0.18
CAPNS1P04632 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CAPNS1P04632 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CAPNS1P04632 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CAPNS1P04632 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC16.19■□□□□ 0.18
CAPNS1P04632 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
CAPNS1P04632 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CAPNS1P04632 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CAPNS1P04632 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC16.18■□□□□ 0.18
CAPNS1P04632 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CAPNS1P04632 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC16.18■□□□□ 0.18
CAPNS1P04632 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CAPNS1P04632 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
CAPNS1P04632 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CAPNS1P04632 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
CAPNS1P04632 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
CAPNS1P04632 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC16.18■□□□□ 0.18
CAPNS1P04632 PTPA-220ENST00000436883 532 ntTSL 4 BASIC16.18■□□□□ 0.18
CAPNS1P04632 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC16.18■□□□□ 0.18
CAPNS1P04632 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CAPNS1P04632 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC16.18■□□□□ 0.18
CAPNS1P04632 SLC25A6P2-201ENST00000497974 877 ntBASIC16.18■□□□□ 0.18
CAPNS1P04632 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC16.18■□□□□ 0.18
CAPNS1P04632 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC16.18■□□□□ 0.18
CAPNS1P04632 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC16.18■□□□□ 0.18
CAPNS1P04632 TMED1-207ENST00000591695 809 ntTSL 5 BASIC16.18■□□□□ 0.18
CAPNS1P04632 Six3os1_5.1-201ENST00000611000 271 ntBASIC16.18■□□□□ 0.18
CAPNS1P04632 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC16.18■□□□□ 0.18
CAPNS1P04632 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC16.18■□□□□ 0.18
CAPNS1P04632 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CAPNS1P04632 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC16.18■□□□□ 0.18
CAPNS1P04632 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC16.18■□□□□ 0.18
CAPNS1P04632 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CAPNS1P04632 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CAPNS1P04632 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
CAPNS1P04632 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CAPNS1P04632 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
CAPNS1P04632 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC16.18■□□□□ 0.18
CAPNS1P04632 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
CAPNS1P04632 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
CAPNS1P04632 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CAPNS1P04632 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CAPNS1P04632 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CAPNS1P04632 AC129492.6-201ENST00000611383 1305 ntBASIC16.18■□□□□ 0.18
CAPNS1P04632 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CAPNS1P04632 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC16.18■□□□□ 0.18
CAPNS1P04632 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC16.18■□□□□ 0.18
CAPNS1P04632 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CAPNS1P04632 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CAPNS1P04632 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CAPNS1P04632 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CAPNS1P04632 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CAPNS1P04632 STX3-203ENST00000529177 1571 ntTSL 2 BASIC16.17■□□□□ 0.18
CAPNS1P04632 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CAPNS1P04632 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CAPNS1P04632 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CAPNS1P04632 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CAPNS1P04632 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms