Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 CDC14C-201ENST00000428251 1719 ntBASIC16.65■□□□□ 0.26
MT-ND3P03897 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.26
MT-ND3P03897 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
MT-ND3P03897 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC16.64■□□□□ 0.26
MT-ND3P03897 LINC02447-202ENST00000501888 2146 ntBASIC16.64■□□□□ 0.25
MT-ND3P03897 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
MT-ND3P03897 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
MT-ND3P03897 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
MT-ND3P03897 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
MT-ND3P03897 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC16.64■□□□□ 0.25
MT-ND3P03897 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
MT-ND3P03897 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
MT-ND3P03897 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
MT-ND3P03897 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
MT-ND3P03897 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
MT-ND3P03897 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC16.64■□□□□ 0.25
MT-ND3P03897 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
MT-ND3P03897 BEX3-201ENST00000361298 921 ntTSL 2 BASIC16.64■□□□□ 0.25
MT-ND3P03897 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
MT-ND3P03897 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC16.64■□□□□ 0.25
MT-ND3P03897 DNAJB3-201ENST00000446806 729 ntBASIC16.64■□□□□ 0.25
MT-ND3P03897 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC16.64■□□□□ 0.25
MT-ND3P03897 AC136632.2-201ENST00000512891 861 ntBASIC16.64■□□□□ 0.25
MT-ND3P03897 PGAM5P1-201ENST00000518923 814 ntBASIC16.64■□□□□ 0.25
MT-ND3P03897 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
MT-ND3P03897 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC16.64■□□□□ 0.25
MT-ND3P03897 SDCCAG3P1-201ENST00000589292 1150 ntBASIC16.64■□□□□ 0.25
MT-ND3P03897 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC16.64■□□□□ 0.25
MT-ND3P03897 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC16.64■□□□□ 0.25
MT-ND3P03897 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC16.64■□□□□ 0.25
MT-ND3P03897 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
MT-ND3P03897 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
MT-ND3P03897 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
MT-ND3P03897 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC16.64■□□□□ 0.25
MT-ND3P03897 AC131009.4-201ENST00000624048 1740 ntBASIC16.64■□□□□ 0.25
MT-ND3P03897 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC16.64■□□□□ 0.25
MT-ND3P03897 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC16.64■□□□□ 0.25
MT-ND3P03897 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
MT-ND3P03897 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
MT-ND3P03897 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
MT-ND3P03897 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
MT-ND3P03897 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
MT-ND3P03897 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
MT-ND3P03897 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
MT-ND3P03897 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
MT-ND3P03897 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
MT-ND3P03897 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
MT-ND3P03897 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
MT-ND3P03897 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
MT-ND3P03897 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
MT-ND3P03897 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
MT-ND3P03897 AC112504.1-201ENST00000623415 1841 ntBASIC16.63■□□□□ 0.25
MT-ND3P03897 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
MT-ND3P03897 AMT-233ENST00000636522 1620 ntTSL 2 BASIC16.63■□□□□ 0.25
MT-ND3P03897 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
MT-ND3P03897 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC16.63■□□□□ 0.25
MT-ND3P03897 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
MT-ND3P03897 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
MT-ND3P03897 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
MT-ND3P03897 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
MT-ND3P03897 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC16.63■□□□□ 0.25
MT-ND3P03897 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC16.63■□□□□ 0.25
MT-ND3P03897 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
MT-ND3P03897 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
MT-ND3P03897 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
MT-ND3P03897 CENPM-204ENST00000402420 688 ntTSL 5 BASIC16.63■□□□□ 0.25
MT-ND3P03897 KRT18P27-201ENST00000427733 1299 ntBASIC16.63■□□□□ 0.25
MT-ND3P03897 PAWRP1-201ENST00000451083 565 ntBASIC16.63■□□□□ 0.25
MT-ND3P03897 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
MT-ND3P03897 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC16.63■□□□□ 0.25
MT-ND3P03897 ACE-203ENST00000413513 2237 ntTSL 2 BASIC16.63■□□□□ 0.25
MT-ND3P03897 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
MT-ND3P03897 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC16.63■□□□□ 0.25
MT-ND3P03897 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
MT-ND3P03897 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
MT-ND3P03897 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
MT-ND3P03897 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
MT-ND3P03897 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
MT-ND3P03897 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC16.63■□□□□ 0.25
MT-ND3P03897 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
MT-ND3P03897 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
MT-ND3P03897 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
MT-ND3P03897 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
MT-ND3P03897 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
MT-ND3P03897 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
MT-ND3P03897 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
MT-ND3P03897 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
MT-ND3P03897 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
MT-ND3P03897 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC16.62■□□□□ 0.25
MT-ND3P03897 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
MT-ND3P03897 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
MT-ND3P03897 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC16.62■□□□□ 0.25
MT-ND3P03897 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
MT-ND3P03897 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC16.62■□□□□ 0.25
MT-ND3P03897 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
MT-ND3P03897 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
MT-ND3P03897 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
MT-ND3P03897 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
MT-ND3P03897 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC16.62■□□□□ 0.25
MT-ND3P03897 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 56.5 ms