Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC19.3■□□□□ 0.68
COL1A1P02452 RARRES2P5-201ENST00000564013 466 ntBASIC19.3■□□□□ 0.68
COL1A1P02452 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
COL1A1P02452 AC097359.3-201ENST00000603982 1210 ntBASIC19.3■□□□□ 0.68
COL1A1P02452 TMEM261P1-201ENST00000604899 340 ntBASIC19.3■□□□□ 0.68
COL1A1P02452 COX11-210ENST00000639671 696 ntBASIC19.3■□□□□ 0.68
COL1A1P02452 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
COL1A1P02452 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
COL1A1P02452 CDC14C-201ENST00000428251 1719 ntBASIC19.3■□□□□ 0.68
COL1A1P02452 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
COL1A1P02452 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC19.3■□□□□ 0.68
COL1A1P02452 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
COL1A1P02452 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
COL1A1P02452 CLK3P2-201ENST00000427566 1453 ntBASIC19.3■□□□□ 0.68
COL1A1P02452 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
COL1A1P02452 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
COL1A1P02452 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC19.3■□□□□ 0.68
COL1A1P02452 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC19.3■□□□□ 0.68
COL1A1P02452 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
COL1A1P02452 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
COL1A1P02452 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
COL1A1P02452 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
COL1A1P02452 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
COL1A1P02452 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
COL1A1P02452 VILL-207ENST00000465644 1857 ntTSL 5 BASIC19.3■□□□□ 0.68
COL1A1P02452 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
COL1A1P02452 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
COL1A1P02452 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
COL1A1P02452 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
COL1A1P02452 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC19.29■□□□□ 0.68
COL1A1P02452 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
COL1A1P02452 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC19.29■□□□□ 0.68
COL1A1P02452 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
COL1A1P02452 SNX29P1-201ENST00000548357 1007 ntBASIC19.29■□□□□ 0.68
COL1A1P02452 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC19.29■□□□□ 0.68
COL1A1P02452 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC19.29■□□□□ 0.68
COL1A1P02452 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC19.29■□□□□ 0.68
COL1A1P02452 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC19.29■□□□□ 0.68
COL1A1P02452 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
COL1A1P02452 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
COL1A1P02452 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
COL1A1P02452 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
COL1A1P02452 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC19.29■□□□□ 0.68
COL1A1P02452 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
COL1A1P02452 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
COL1A1P02452 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC19.29■□□□□ 0.68
COL1A1P02452 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
COL1A1P02452 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
COL1A1P02452 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC19.29■□□□□ 0.68
COL1A1P02452 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC19.29■□□□□ 0.68
COL1A1P02452 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
COL1A1P02452 AC018892.3-201ENST00000623986 2499 ntBASIC19.29■□□□□ 0.68
COL1A1P02452 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC19.29■□□□□ 0.68
COL1A1P02452 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
COL1A1P02452 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
COL1A1P02452 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC19.29■□□□□ 0.68
COL1A1P02452 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
COL1A1P02452 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC19.28■□□□□ 0.68
COL1A1P02452 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC19.28■□□□□ 0.68
COL1A1P02452 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC19.28■□□□□ 0.68
COL1A1P02452 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC19.28■□□□□ 0.68
COL1A1P02452 FADS2-205ENST00000517839 469 ntTSL 3 BASIC19.28■□□□□ 0.68
COL1A1P02452 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC19.28■□□□□ 0.68
COL1A1P02452 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
COL1A1P02452 AL606495.2-201ENST00000605867 535 ntBASIC19.28■□□□□ 0.68
COL1A1P02452 AL662844.4-201ENST00000606367 2838 ntBASIC19.28■□□□□ 0.68
COL1A1P02452 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC19.28■□□□□ 0.68
COL1A1P02452 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
COL1A1P02452 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
COL1A1P02452 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
COL1A1P02452 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
COL1A1P02452 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC19.28■□□□□ 0.68
COL1A1P02452 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
COL1A1P02452 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
COL1A1P02452 PCDHA14-201ENST00000506751 2298 ntBASIC19.28■□□□□ 0.68
COL1A1P02452 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC19.28■□□□□ 0.68
COL1A1P02452 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
COL1A1P02452 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
COL1A1P02452 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
COL1A1P02452 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
COL1A1P02452 MTHFR-217ENST00000641820 1569 ntBASIC19.28■□□□□ 0.68
COL1A1P02452 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
COL1A1P02452 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC19.28■□□□□ 0.68
COL1A1P02452 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
COL1A1P02452 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC19.28■□□□□ 0.68
COL1A1P02452 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
COL1A1P02452 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC19.28■□□□□ 0.68
COL1A1P02452 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC19.28■□□□□ 0.68
COL1A1P02452 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC19.28■□□□□ 0.68
COL1A1P02452 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC19.28■□□□□ 0.68
COL1A1P02452 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC19.28■□□□□ 0.68
COL1A1P02452 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
COL1A1P02452 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC19.27■□□□□ 0.68
COL1A1P02452 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
COL1A1P02452 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC19.27■□□□□ 0.68
COL1A1P02452 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
COL1A1P02452 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC19.27■□□□□ 0.68
COL1A1P02452 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
COL1A1P02452 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
COL1A1P02452 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC19.27■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 11.4 ms