Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TIMP1P01033 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
TIMP1P01033 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TIMP1P01033 AC006001.1-201ENST00000325130 474 ntBASIC17.32■□□□□ 0.36
TIMP1P01033 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC17.32■□□□□ 0.36
TIMP1P01033 BTBD6P1-201ENST00000412176 1267 ntBASIC17.32■□□□□ 0.36
TIMP1P01033 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC17.32■□□□□ 0.36
TIMP1P01033 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TIMP1P01033 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC17.32■□□□□ 0.36
TIMP1P01033 NEU3-202ENST00000526068 431 ntTSL 2 BASIC17.32■□□□□ 0.36
TIMP1P01033 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC17.32■□□□□ 0.36
TIMP1P01033 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC17.32■□□□□ 0.36
TIMP1P01033 AC025279.2-201ENST00000569730 653 ntBASIC17.32■□□□□ 0.36
TIMP1P01033 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC17.32■□□□□ 0.36
TIMP1P01033 KLK3-211ENST00000597483 810 ntTSL 2 BASIC17.32■□□□□ 0.36
TIMP1P01033 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC17.32■□□□□ 0.36
TIMP1P01033 AL008638.5-201ENST00000623814 1298 ntBASIC17.32■□□□□ 0.36
TIMP1P01033 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC17.32■□□□□ 0.36
TIMP1P01033 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TIMP1P01033 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC17.32■□□□□ 0.36
TIMP1P01033 REXO1L8P-201ENST00000604378 1897 ntBASIC17.32■□□□□ 0.36
TIMP1P01033 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TIMP1P01033 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC17.32■□□□□ 0.36
TIMP1P01033 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TIMP1P01033 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC17.32■□□□□ 0.36
TIMP1P01033 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TIMP1P01033 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC17.32■□□□□ 0.36
TIMP1P01033 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TIMP1P01033 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC17.31■□□□□ 0.36
TIMP1P01033 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TIMP1P01033 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC17.31■□□□□ 0.36
TIMP1P01033 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
TIMP1P01033 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
TIMP1P01033 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC17.31■□□□□ 0.36
TIMP1P01033 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC17.31■□□□□ 0.36
TIMP1P01033 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TIMP1P01033 RPS3-201ENST00000278572 907 ntTSL 3 BASIC17.31■□□□□ 0.36
TIMP1P01033 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TIMP1P01033 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
TIMP1P01033 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TIMP1P01033 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
TIMP1P01033 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC17.31■□□□□ 0.36
TIMP1P01033 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC17.31■□□□□ 0.36
TIMP1P01033 AL591846.1-201ENST00000451736 433 ntBASIC17.31■□□□□ 0.36
TIMP1P01033 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TIMP1P01033 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
TIMP1P01033 AC079328.1-201ENST00000560358 952 ntBASIC17.31■□□□□ 0.36
TIMP1P01033 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC17.31■□□□□ 0.36
TIMP1P01033 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC17.31■□□□□ 0.36
TIMP1P01033 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
TIMP1P01033 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TIMP1P01033 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC17.31■□□□□ 0.36
TIMP1P01033 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TIMP1P01033 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC17.31■□□□□ 0.36
TIMP1P01033 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TIMP1P01033 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
TIMP1P01033 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
TIMP1P01033 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC17.3■□□□□ 0.36
TIMP1P01033 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC17.3■□□□□ 0.36
TIMP1P01033 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
TIMP1P01033 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TIMP1P01033 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
TIMP1P01033 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TIMP1P01033 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TIMP1P01033 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC17.3■□□□□ 0.36
TIMP1P01033 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC17.3■□□□□ 0.36
TIMP1P01033 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC17.3■□□□□ 0.36
TIMP1P01033 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TIMP1P01033 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TIMP1P01033 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
TIMP1P01033 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
TIMP1P01033 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
TIMP1P01033 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC17.3■□□□□ 0.36
TIMP1P01033 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC17.3■□□□□ 0.36
TIMP1P01033 AC007969.1-201ENST00000433675 447 ntBASIC17.3■□□□□ 0.36
TIMP1P01033 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC17.3■□□□□ 0.36
TIMP1P01033 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC17.3■□□□□ 0.36
TIMP1P01033 ACTG1P17-201ENST00000558391 1119 ntBASIC17.3■□□□□ 0.36
TIMP1P01033 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
TIMP1P01033 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TIMP1P01033 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TIMP1P01033 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TIMP1P01033 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TIMP1P01033 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
TIMP1P01033 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
TIMP1P01033 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TIMP1P01033 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC17.29■□□□□ 0.36
TIMP1P01033 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TIMP1P01033 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TIMP1P01033 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TIMP1P01033 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TIMP1P01033 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
TIMP1P01033 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC17.29■□□□□ 0.36
TIMP1P01033 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC17.29■□□□□ 0.36
TIMP1P01033 GRN-222ENST00000639447 1314 ntTSL 2 BASIC17.29■□□□□ 0.36
TIMP1P01033 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC17.29■□□□□ 0.36
TIMP1P01033 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
TIMP1P01033 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
TIMP1P01033 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC17.29■□□□□ 0.36
TIMP1P01033 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms