Protein–RNA interactions for Protein: O96006

ZBED1, Zinc finger BED domain-containing protein 1, humanhuman

Predictions only

Length 694 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZBED1O96006 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
ZBED1O96006 AL589702.1-201ENST00000641229 1509 ntBASIC17.21■□□□□ 0.34
ZBED1O96006 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
ZBED1O96006 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
ZBED1O96006 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
ZBED1O96006 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
ZBED1O96006 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC17.2■□□□□ 0.34
ZBED1O96006 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
ZBED1O96006 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
ZBED1O96006 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ZBED1O96006 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC17.2■□□□□ 0.34
ZBED1O96006 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
ZBED1O96006 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
ZBED1O96006 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC17.2■□□□□ 0.34
ZBED1O96006 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
ZBED1O96006 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
ZBED1O96006 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
ZBED1O96006 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
ZBED1O96006 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
ZBED1O96006 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
ZBED1O96006 GGCT-205ENST00000409436 954 ntTSL 3 BASIC17.2■□□□□ 0.34
ZBED1O96006 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC17.2■□□□□ 0.34
ZBED1O96006 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
ZBED1O96006 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC17.2■□□□□ 0.34
ZBED1O96006 AC004449.1-201ENST00000564240 433 ntBASIC17.2■□□□□ 0.34
ZBED1O96006 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ZBED1O96006 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC17.2■□□□□ 0.34
ZBED1O96006 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ZBED1O96006 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC17.2■□□□□ 0.34
ZBED1O96006 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
ZBED1O96006 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC17.2■□□□□ 0.34
ZBED1O96006 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
ZBED1O96006 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
ZBED1O96006 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC17.2■□□□□ 0.34
ZBED1O96006 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC17.2■□□□□ 0.34
ZBED1O96006 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
ZBED1O96006 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ZBED1O96006 RELA-227ENST00000615805 2236 ntTSL 5 BASIC17.2■□□□□ 0.34
ZBED1O96006 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ZBED1O96006 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ZBED1O96006 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
ZBED1O96006 AC026691.1-201ENST00000602502 2017 ntBASIC17.2■□□□□ 0.34
ZBED1O96006 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC17.19■□□□□ 0.34
ZBED1O96006 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
ZBED1O96006 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC17.19■□□□□ 0.34
ZBED1O96006 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ZBED1O96006 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ZBED1O96006 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ZBED1O96006 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ZBED1O96006 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
ZBED1O96006 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ZBED1O96006 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ZBED1O96006 U82695.1-201ENST00000635752 1889 ntBASIC17.19■□□□□ 0.34
ZBED1O96006 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
ZBED1O96006 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
ZBED1O96006 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
ZBED1O96006 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
ZBED1O96006 GATD1-206ENST00000526325 756 ntTSL 5 BASIC17.19■□□□□ 0.34
ZBED1O96006 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ZBED1O96006 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
ZBED1O96006 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC17.19■□□□□ 0.34
ZBED1O96006 AC025678.2-201ENST00000562061 970 ntBASIC17.19■□□□□ 0.34
ZBED1O96006 AC026150.2-201ENST00000564693 1156 ntBASIC17.19■□□□□ 0.34
ZBED1O96006 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC17.19■□□□□ 0.34
ZBED1O96006 AP001059.3-201ENST00000619053 235 ntBASIC17.19■□□□□ 0.34
ZBED1O96006 RAB34-224ENST00000636513 888 ntTSL 5 BASIC17.19■□□□□ 0.34
ZBED1O96006 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC17.19■□□□□ 0.34
ZBED1O96006 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC17.19■□□□□ 0.34
ZBED1O96006 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC17.19■□□□□ 0.34
ZBED1O96006 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ZBED1O96006 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ZBED1O96006 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
ZBED1O96006 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
ZBED1O96006 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC17.19■□□□□ 0.34
ZBED1O96006 AP3S2-216ENST00000617003 1561 ntBASIC17.19■□□□□ 0.34
ZBED1O96006 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ZBED1O96006 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
ZBED1O96006 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ZBED1O96006 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
ZBED1O96006 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
ZBED1O96006 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ZBED1O96006 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC17.18■□□□□ 0.34
ZBED1O96006 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ZBED1O96006 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC17.18■□□□□ 0.34
ZBED1O96006 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ZBED1O96006 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
ZBED1O96006 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
ZBED1O96006 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
ZBED1O96006 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
ZBED1O96006 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
ZBED1O96006 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ZBED1O96006 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC17.18■□□□□ 0.34
ZBED1O96006 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
ZBED1O96006 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
ZBED1O96006 PMS2P2-201ENST00000425039 1128 ntBASIC17.18■□□□□ 0.34
ZBED1O96006 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC17.18■□□□□ 0.34
ZBED1O96006 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC17.18■□□□□ 0.34
ZBED1O96006 SPDYE14P-201ENST00000442619 822 ntBASIC17.18■□□□□ 0.34
ZBED1O96006 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC17.18■□□□□ 0.34
ZBED1O96006 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms