Protein–RNA interactions for Protein: O95476

CTDNEP1, CTD nuclear envelope phosphatase 1, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1O95476 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC18.76■□□□□ 0.59
CTDNEP1O95476 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC18.76■□□□□ 0.59
CTDNEP1O95476 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CTDNEP1O95476 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CTDNEP1O95476 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CTDNEP1O95476 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
CTDNEP1O95476 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CTDNEP1O95476 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CTDNEP1O95476 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
CTDNEP1O95476 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CTDNEP1O95476 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CTDNEP1O95476 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CTDNEP1O95476 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
CTDNEP1O95476 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
CTDNEP1O95476 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC18.75■□□□□ 0.59
CTDNEP1O95476 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CTDNEP1O95476 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC18.75■□□□□ 0.59
CTDNEP1O95476 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC18.75■□□□□ 0.59
CTDNEP1O95476 RNA5SP410-201ENST00000516285 106 ntBASIC18.75■□□□□ 0.59
CTDNEP1O95476 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
CTDNEP1O95476 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC18.75■□□□□ 0.59
CTDNEP1O95476 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC18.75■□□□□ 0.59
CTDNEP1O95476 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC18.75■□□□□ 0.59
CTDNEP1O95476 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC18.75■□□□□ 0.59
CTDNEP1O95476 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC18.75■□□□□ 0.59
CTDNEP1O95476 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC18.75■□□□□ 0.59
CTDNEP1O95476 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CTDNEP1O95476 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CTDNEP1O95476 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CTDNEP1O95476 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
CTDNEP1O95476 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
CTDNEP1O95476 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
CTDNEP1O95476 AC092850.2-201ENST00000623821 2697 ntBASIC18.75■□□□□ 0.59
CTDNEP1O95476 CICP13-201ENST00000422015 2789 ntBASIC18.75■□□□□ 0.59
CTDNEP1O95476 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CTDNEP1O95476 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC18.74■□□□□ 0.59
CTDNEP1O95476 UXT-AS1-201ENST00000590504 1525 ntBASIC18.74■□□□□ 0.59
CTDNEP1O95476 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CTDNEP1O95476 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC18.74■□□□□ 0.59
CTDNEP1O95476 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
CTDNEP1O95476 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CTDNEP1O95476 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CTDNEP1O95476 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CTDNEP1O95476 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CTDNEP1O95476 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC18.74■□□□□ 0.59
CTDNEP1O95476 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CTDNEP1O95476 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC18.74■□□□□ 0.59
CTDNEP1O95476 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
CTDNEP1O95476 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC18.74■□□□□ 0.59
CTDNEP1O95476 RPS8P6-201ENST00000426177 609 ntBASIC18.74■□□□□ 0.59
CTDNEP1O95476 GPS2P2-201ENST00000430745 888 ntBASIC18.74■□□□□ 0.59
CTDNEP1O95476 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC18.74■□□□□ 0.59
CTDNEP1O95476 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC18.74■□□□□ 0.59
CTDNEP1O95476 IGHV3-62-201ENST00000520057 340 ntBASIC18.74■□□□□ 0.59
CTDNEP1O95476 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC18.74■□□□□ 0.59
CTDNEP1O95476 AC024267.1-201ENST00000582320 895 ntBASIC18.74■□□□□ 0.59
CTDNEP1O95476 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC18.74■□□□□ 0.59
CTDNEP1O95476 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
CTDNEP1O95476 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CTDNEP1O95476 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CTDNEP1O95476 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC18.74■□□□□ 0.59
CTDNEP1O95476 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC18.74■□□□□ 0.59
CTDNEP1O95476 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CTDNEP1O95476 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
CTDNEP1O95476 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC18.74■□□□□ 0.59
CTDNEP1O95476 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC18.74■□□□□ 0.59
CTDNEP1O95476 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CTDNEP1O95476 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CTDNEP1O95476 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
CTDNEP1O95476 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
CTDNEP1O95476 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CTDNEP1O95476 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CTDNEP1O95476 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC18.73■□□□□ 0.59
CTDNEP1O95476 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC18.73■□□□□ 0.59
CTDNEP1O95476 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CTDNEP1O95476 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
CTDNEP1O95476 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CTDNEP1O95476 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CTDNEP1O95476 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CTDNEP1O95476 CD81-202ENST00000381036 880 ntTSL 3 BASIC18.73■□□□□ 0.59
CTDNEP1O95476 HLA-H-201ENST00000383620 1096 ntBASIC18.73■□□□□ 0.59
CTDNEP1O95476 CBR1-202ENST00000399191 838 ntTSL 3 BASIC18.73■□□□□ 0.59
CTDNEP1O95476 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC18.73■□□□□ 0.59
CTDNEP1O95476 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC18.73■□□□□ 0.59
CTDNEP1O95476 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC18.73■□□□□ 0.59
CTDNEP1O95476 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC18.73■□□□□ 0.59
CTDNEP1O95476 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC18.73■□□□□ 0.59
CTDNEP1O95476 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CTDNEP1O95476 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CTDNEP1O95476 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CTDNEP1O95476 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC18.73■□□□□ 0.59
CTDNEP1O95476 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC18.73■□□□□ 0.59
CTDNEP1O95476 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
CTDNEP1O95476 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CTDNEP1O95476 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CTDNEP1O95476 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CTDNEP1O95476 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CTDNEP1O95476 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
CTDNEP1O95476 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
CTDNEP1O95476 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms