Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC21.12■□□□□ 0.97
LTN1O94822 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC21.12■□□□□ 0.97
LTN1O94822 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
LTN1O94822 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
LTN1O94822 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC21.12■□□□□ 0.97
LTN1O94822 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC21.12■□□□□ 0.97
LTN1O94822 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
LTN1O94822 DRD5P1-201ENST00000456605 1438 ntBASIC21.12■□□□□ 0.97
LTN1O94822 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC21.12■□□□□ 0.97
LTN1O94822 USE1-206ENST00000595101 1776 ntTSL 2 BASIC21.12■□□□□ 0.97
LTN1O94822 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC21.12■□□□□ 0.97
LTN1O94822 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
LTN1O94822 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC21.12■□□□□ 0.97
LTN1O94822 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC21.12■□□□□ 0.97
LTN1O94822 AC093433.1-201ENST00000458048 571 ntBASIC21.12■□□□□ 0.97
LTN1O94822 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC21.12■□□□□ 0.97
LTN1O94822 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC21.12■□□□□ 0.97
LTN1O94822 RN7SL219P-201ENST00000582872 296 ntBASIC21.12■□□□□ 0.97
LTN1O94822 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
LTN1O94822 MIR6787-201ENST00000616675 61 ntBASIC21.12■□□□□ 0.97
LTN1O94822 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
LTN1O94822 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
LTN1O94822 AGER-206ENST00000375070 1463 ntTSL 5 BASIC21.12■□□□□ 0.97
LTN1O94822 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
LTN1O94822 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
LTN1O94822 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
LTN1O94822 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
LTN1O94822 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
LTN1O94822 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
LTN1O94822 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
LTN1O94822 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
LTN1O94822 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
LTN1O94822 AC005332.8-201ENST00000622750 2735 ntBASIC21.11■□□□□ 0.97
LTN1O94822 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
LTN1O94822 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
LTN1O94822 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
LTN1O94822 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
LTN1O94822 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC21.11■□□□□ 0.97
LTN1O94822 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC21.11■□□□□ 0.97
LTN1O94822 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC21.11■□□□□ 0.97
LTN1O94822 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC21.11■□□□□ 0.97
LTN1O94822 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC21.11■□□□□ 0.97
LTN1O94822 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
LTN1O94822 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC21.11■□□□□ 0.97
LTN1O94822 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
LTN1O94822 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC21.11■□□□□ 0.97
LTN1O94822 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
LTN1O94822 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
LTN1O94822 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC21.11■□□□□ 0.97
LTN1O94822 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
LTN1O94822 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
LTN1O94822 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
LTN1O94822 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
LTN1O94822 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
LTN1O94822 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
LTN1O94822 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
LTN1O94822 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
LTN1O94822 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
LTN1O94822 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC21.11■□□□□ 0.97
LTN1O94822 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
LTN1O94822 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC21.1■□□□□ 0.97
LTN1O94822 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
LTN1O94822 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
LTN1O94822 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
LTN1O94822 CNN2P8-201ENST00000421872 913 ntBASIC21.1■□□□□ 0.97
LTN1O94822 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC21.1■□□□□ 0.97
LTN1O94822 AC026954.1-201ENST00000429771 1293 ntBASIC21.1■□□□□ 0.97
LTN1O94822 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
LTN1O94822 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC21.1■□□□□ 0.97
LTN1O94822 RN7SL560P-201ENST00000577943 264 ntBASIC21.1■□□□□ 0.97
LTN1O94822 GPR182-203ENST00000622922 591 ntBASIC21.1■□□□□ 0.97
LTN1O94822 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC21.1■□□□□ 0.97
LTN1O94822 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC21.1■□□□□ 0.97
LTN1O94822 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
LTN1O94822 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
LTN1O94822 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC21.1■□□□□ 0.97
LTN1O94822 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
LTN1O94822 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC21.1■□□□□ 0.97
LTN1O94822 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
LTN1O94822 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
LTN1O94822 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
LTN1O94822 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
LTN1O94822 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
LTN1O94822 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
LTN1O94822 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
LTN1O94822 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
LTN1O94822 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC21.1■□□□□ 0.97
LTN1O94822 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC21.1■□□□□ 0.97
LTN1O94822 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
LTN1O94822 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
LTN1O94822 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
LTN1O94822 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
LTN1O94822 AC016694.1-201ENST00000434179 700 ntBASIC21.1■□□□□ 0.97
LTN1O94822 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
LTN1O94822 AC026410.3-201ENST00000514280 936 ntBASIC21.1■□□□□ 0.97
LTN1O94822 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC21.1■□□□□ 0.97
LTN1O94822 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC21.1■□□□□ 0.97
LTN1O94822 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC21.1■□□□□ 0.97
LTN1O94822 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC21.1■□□□□ 0.97
LTN1O94822 UBL5-208ENST00000593087 320 ntTSL 3 BASIC21.1■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms