Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC16.99■□□□□ 0.31
BEST1O76090 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
BEST1O76090 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
BEST1O76090 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC16.99■□□□□ 0.31
BEST1O76090 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
BEST1O76090 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
BEST1O76090 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC16.99■□□□□ 0.31
BEST1O76090 KRT8P12-202ENST00000472924 1397 ntBASIC16.99■□□□□ 0.31
BEST1O76090 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
BEST1O76090 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC16.99■□□□□ 0.31
BEST1O76090 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
BEST1O76090 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC16.99■□□□□ 0.31
BEST1O76090 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC16.99■□□□□ 0.31
BEST1O76090 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
BEST1O76090 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
BEST1O76090 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC16.99■□□□□ 0.31
BEST1O76090 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC16.99■□□□□ 0.31
BEST1O76090 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC16.99■□□□□ 0.31
BEST1O76090 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
BEST1O76090 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
BEST1O76090 BNIP3P1-202ENST00000550043 1585 ntBASIC16.98■□□□□ 0.31
BEST1O76090 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
BEST1O76090 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
BEST1O76090 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
BEST1O76090 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
BEST1O76090 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
BEST1O76090 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC16.98■□□□□ 0.31
BEST1O76090 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC16.98■□□□□ 0.31
BEST1O76090 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
BEST1O76090 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
BEST1O76090 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
BEST1O76090 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
BEST1O76090 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
BEST1O76090 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
BEST1O76090 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
BEST1O76090 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC16.98■□□□□ 0.31
BEST1O76090 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
BEST1O76090 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
BEST1O76090 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC16.98■□□□□ 0.31
BEST1O76090 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
BEST1O76090 MIR661-201ENST00000384842 89 ntBASIC16.98■□□□□ 0.31
BEST1O76090 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC16.98■□□□□ 0.31
BEST1O76090 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
BEST1O76090 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
BEST1O76090 AL512361.1-201ENST00000554200 418 ntBASIC16.98■□□□□ 0.31
BEST1O76090 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC16.98■□□□□ 0.31
BEST1O76090 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC16.98■□□□□ 0.31
BEST1O76090 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
BEST1O76090 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
BEST1O76090 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
BEST1O76090 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC16.98■□□□□ 0.31
BEST1O76090 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
BEST1O76090 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
BEST1O76090 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
BEST1O76090 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
BEST1O76090 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
BEST1O76090 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC16.98■□□□□ 0.31
BEST1O76090 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC16.98■□□□□ 0.31
BEST1O76090 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
BEST1O76090 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
BEST1O76090 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC16.98■□□□□ 0.31
BEST1O76090 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC16.98■□□□□ 0.31
BEST1O76090 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
BEST1O76090 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
BEST1O76090 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
BEST1O76090 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
BEST1O76090 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC16.97■□□□□ 0.31
BEST1O76090 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
BEST1O76090 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
BEST1O76090 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
BEST1O76090 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
BEST1O76090 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC16.97■□□□□ 0.31
BEST1O76090 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC16.97■□□□□ 0.31
BEST1O76090 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
BEST1O76090 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
BEST1O76090 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC16.97■□□□□ 0.31
BEST1O76090 CENPM-206ENST00000407253 818 ntTSL 2 BASIC16.97■□□□□ 0.31
BEST1O76090 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC16.97■□□□□ 0.31
BEST1O76090 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC16.97■□□□□ 0.31
BEST1O76090 INGX-202ENST00000489074 768 ntBASIC16.97■□□□□ 0.31
BEST1O76090 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
BEST1O76090 RNA5SP421-201ENST00000516864 134 ntBASIC16.97■□□□□ 0.31
BEST1O76090 AC009407.1-201ENST00000568958 598 ntBASIC16.97■□□□□ 0.31
BEST1O76090 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
BEST1O76090 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
BEST1O76090 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC16.97■□□□□ 0.31
BEST1O76090 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
BEST1O76090 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC16.97■□□□□ 0.31
BEST1O76090 BLK-205ENST00000529894 2017 ntTSL 5 BASIC16.97■□□□□ 0.31
BEST1O76090 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
BEST1O76090 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
BEST1O76090 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC16.97■□□□□ 0.31
BEST1O76090 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
BEST1O76090 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
BEST1O76090 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
BEST1O76090 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
BEST1O76090 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
BEST1O76090 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC16.97■□□□□ 0.31
BEST1O76090 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC16.97■□□□□ 0.31
BEST1O76090 AC087499.5-201ENST00000452760 1342 ntBASIC16.96■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms