Protein–RNA interactions for Protein: O60813

PRAMEF11, PRAME family member 11, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF11O60813 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
PRAMEF11O60813 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
PRAMEF11O60813 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC16.43■□□□□ 0.22
PRAMEF11O60813 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
PRAMEF11O60813 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
PRAMEF11O60813 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC16.43■□□□□ 0.22
PRAMEF11O60813 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
PRAMEF11O60813 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
PRAMEF11O60813 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PRAMEF11O60813 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
PRAMEF11O60813 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PRAMEF11O60813 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
PRAMEF11O60813 AC004987.2-201ENST00000395959 1148 ntBASIC16.43■□□□□ 0.22
PRAMEF11O60813 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC16.43■□□□□ 0.22
PRAMEF11O60813 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC16.43■□□□□ 0.22
PRAMEF11O60813 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PRAMEF11O60813 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PRAMEF11O60813 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC16.43■□□□□ 0.22
PRAMEF11O60813 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC16.43■□□□□ 0.22
PRAMEF11O60813 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC16.43■□□□□ 0.22
PRAMEF11O60813 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
PRAMEF11O60813 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PRAMEF11O60813 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PRAMEF11O60813 AL603832.2-201ENST00000566195 2125 ntBASIC16.43■□□□□ 0.22
PRAMEF11O60813 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PRAMEF11O60813 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PRAMEF11O60813 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PRAMEF11O60813 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PRAMEF11O60813 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PRAMEF11O60813 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
PRAMEF11O60813 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC16.42■□□□□ 0.22
PRAMEF11O60813 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
PRAMEF11O60813 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC16.42■□□□□ 0.22
PRAMEF11O60813 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PRAMEF11O60813 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PRAMEF11O60813 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
PRAMEF11O60813 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC16.42■□□□□ 0.22
PRAMEF11O60813 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PRAMEF11O60813 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC16.42■□□□□ 0.22
PRAMEF11O60813 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
PRAMEF11O60813 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PRAMEF11O60813 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PRAMEF11O60813 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PRAMEF11O60813 AC024909.3-201ENST00000611513 2257 ntBASIC16.42■□□□□ 0.22
PRAMEF11O60813 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC16.42■□□□□ 0.22
PRAMEF11O60813 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
PRAMEF11O60813 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC16.42■□□□□ 0.22
PRAMEF11O60813 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PRAMEF11O60813 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC16.42■□□□□ 0.22
PRAMEF11O60813 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PRAMEF11O60813 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PRAMEF11O60813 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PRAMEF11O60813 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC16.42■□□□□ 0.22
PRAMEF11O60813 PNMT-202ENST00000394246 821 ntTSL 2 BASIC16.42■□□□□ 0.22
PRAMEF11O60813 BAD-202ENST00000394531 631 ntTSL 3 BASIC16.42■□□□□ 0.22
PRAMEF11O60813 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PRAMEF11O60813 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PRAMEF11O60813 AC107890.1-201ENST00000422478 521 ntBASIC16.42■□□□□ 0.22
PRAMEF11O60813 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC16.42■□□□□ 0.22
PRAMEF11O60813 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC16.42■□□□□ 0.22
PRAMEF11O60813 MTND6P24-201ENST00000440466 518 ntBASIC16.42■□□□□ 0.22
PRAMEF11O60813 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PRAMEF11O60813 SATB1-217ENST00000493952 626 ntTSL 3 BASIC16.42■□□□□ 0.22
PRAMEF11O60813 BAD-207ENST00000544785 525 ntTSL 3 BASIC16.42■□□□□ 0.22
PRAMEF11O60813 AC140878.1-201ENST00000565277 250 ntBASIC16.42■□□□□ 0.22
PRAMEF11O60813 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PRAMEF11O60813 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
PRAMEF11O60813 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
PRAMEF11O60813 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
PRAMEF11O60813 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC16.42■□□□□ 0.22
PRAMEF11O60813 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC16.42■□□□□ 0.22
PRAMEF11O60813 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
PRAMEF11O60813 CDC14C-201ENST00000428251 1719 ntBASIC16.42■□□□□ 0.22
PRAMEF11O60813 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC16.42■□□□□ 0.22
PRAMEF11O60813 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
PRAMEF11O60813 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC16.42■□□□□ 0.22
PRAMEF11O60813 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC16.42■□□□□ 0.22
PRAMEF11O60813 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PRAMEF11O60813 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
PRAMEF11O60813 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PRAMEF11O60813 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PRAMEF11O60813 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
PRAMEF11O60813 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PRAMEF11O60813 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC16.41■□□□□ 0.22
PRAMEF11O60813 GRAMD4P3-201ENST00000621665 1669 ntBASIC16.41■□□□□ 0.22
PRAMEF11O60813 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
PRAMEF11O60813 RPS19-201ENST00000221975 500 ntTSL 3 BASIC16.41■□□□□ 0.22
PRAMEF11O60813 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PRAMEF11O60813 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
PRAMEF11O60813 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
PRAMEF11O60813 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PRAMEF11O60813 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
PRAMEF11O60813 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PRAMEF11O60813 HLA-DRB6-201ENST00000411500 1235 ntBASIC16.41■□□□□ 0.22
PRAMEF11O60813 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC16.41■□□□□ 0.22
PRAMEF11O60813 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PRAMEF11O60813 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
PRAMEF11O60813 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PRAMEF11O60813 RFPL4AP1-201ENST00000530883 850 ntBASIC16.41■□□□□ 0.22
PRAMEF11O60813 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC16.41■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 69.9 ms