Protein–RNA interactions for Protein: O60810

PRAMEF4, PRAME family member 4, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF4O60810 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC15.62■□□□□ 0.09
PRAMEF4O60810 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC15.62■□□□□ 0.09
PRAMEF4O60810 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC15.62■□□□□ 0.09
PRAMEF4O60810 AC093520.2-201ENST00000561830 333 ntBASIC15.62■□□□□ 0.09
PRAMEF4O60810 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
PRAMEF4O60810 AC005829.1-201ENST00000570002 483 ntBASIC15.62■□□□□ 0.09
PRAMEF4O60810 MIR4469-201ENST00000583919 79 ntBASIC15.62■□□□□ 0.09
PRAMEF4O60810 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC15.62■□□□□ 0.09
PRAMEF4O60810 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC15.62■□□□□ 0.09
PRAMEF4O60810 AC022145.2-201ENST00000598203 171 ntBASIC15.62■□□□□ 0.09
PRAMEF4O60810 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PRAMEF4O60810 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC15.62■□□□□ 0.09
PRAMEF4O60810 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PRAMEF4O60810 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PRAMEF4O60810 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC15.62■□□□□ 0.09
PRAMEF4O60810 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
PRAMEF4O60810 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC15.62■□□□□ 0.09
PRAMEF4O60810 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
PRAMEF4O60810 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC15.61■□□□□ 0.09
PRAMEF4O60810 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC15.61■□□□□ 0.09
PRAMEF4O60810 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PRAMEF4O60810 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
PRAMEF4O60810 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
PRAMEF4O60810 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
PRAMEF4O60810 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PRAMEF4O60810 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC15.61■□□□□ 0.09
PRAMEF4O60810 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
PRAMEF4O60810 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PRAMEF4O60810 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC15.61■□□□□ 0.09
PRAMEF4O60810 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PRAMEF4O60810 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC15.61■□□□□ 0.09
PRAMEF4O60810 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC15.61■□□□□ 0.09
PRAMEF4O60810 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
PRAMEF4O60810 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
PRAMEF4O60810 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC15.61■□□□□ 0.09
PRAMEF4O60810 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC15.61■□□□□ 0.09
PRAMEF4O60810 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PRAMEF4O60810 RPSAP43-201ENST00000402237 625 ntBASIC15.61■□□□□ 0.09
PRAMEF4O60810 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC15.61■□□□□ 0.09
PRAMEF4O60810 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC15.61■□□□□ 0.09
PRAMEF4O60810 CEND1P1-201ENST00000451006 455 ntBASIC15.61■□□□□ 0.09
PRAMEF4O60810 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
PRAMEF4O60810 SLC25A39P2-201ENST00000537614 270 ntBASIC15.61■□□□□ 0.09
PRAMEF4O60810 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC15.61■□□□□ 0.09
PRAMEF4O60810 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PRAMEF4O60810 AC010327.4-202ENST00000591484 748 ntBASIC15.61■□□□□ 0.09
PRAMEF4O60810 WDR88-203ENST00000592765 651 ntTSL 5 BASIC15.61■□□□□ 0.09
PRAMEF4O60810 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC15.61■□□□□ 0.09
PRAMEF4O60810 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
PRAMEF4O60810 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC15.61■□□□□ 0.09
PRAMEF4O60810 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC15.61■□□□□ 0.09
PRAMEF4O60810 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC15.61■□□□□ 0.09
PRAMEF4O60810 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC15.61■□□□□ 0.09
PRAMEF4O60810 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
PRAMEF4O60810 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
PRAMEF4O60810 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PRAMEF4O60810 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
PRAMEF4O60810 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PRAMEF4O60810 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PRAMEF4O60810 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC15.61■□□□□ 0.09
PRAMEF4O60810 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PRAMEF4O60810 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PRAMEF4O60810 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PRAMEF4O60810 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PRAMEF4O60810 AP003680.1-201ENST00000598970 3660 ntBASIC15.61■□□□□ 0.09
PRAMEF4O60810 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PRAMEF4O60810 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PRAMEF4O60810 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
PRAMEF4O60810 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
PRAMEF4O60810 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
PRAMEF4O60810 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PRAMEF4O60810 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PRAMEF4O60810 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC15.6■□□□□ 0.09
PRAMEF4O60810 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
PRAMEF4O60810 AC134407.2-201ENST00000625089 1978 ntBASIC15.6■□□□□ 0.09
PRAMEF4O60810 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
PRAMEF4O60810 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC15.6■□□□□ 0.09
PRAMEF4O60810 WARS-232ENST00000556645 2508 ntTSL 5 BASIC15.6■□□□□ 0.09
PRAMEF4O60810 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PRAMEF4O60810 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
PRAMEF4O60810 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PRAMEF4O60810 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
PRAMEF4O60810 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
PRAMEF4O60810 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC15.6■□□□□ 0.09
PRAMEF4O60810 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC15.6■□□□□ 0.09
PRAMEF4O60810 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC15.6■□□□□ 0.09
PRAMEF4O60810 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC15.6■□□□□ 0.09
PRAMEF4O60810 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC15.6■□□□□ 0.09
PRAMEF4O60810 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC15.6■□□□□ 0.09
PRAMEF4O60810 FAM58DP-201ENST00000428076 619 ntBASIC15.6■□□□□ 0.09
PRAMEF4O60810 AL592309.1-201ENST00000443127 649 ntBASIC15.6■□□□□ 0.09
PRAMEF4O60810 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC15.6■□□□□ 0.09
PRAMEF4O60810 GATB-205ENST00000508611 605 ntTSL 2 BASIC15.6■□□□□ 0.09
PRAMEF4O60810 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC15.6■□□□□ 0.09
PRAMEF4O60810 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC15.6■□□□□ 0.09
PRAMEF4O60810 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC15.6■□□□□ 0.09
PRAMEF4O60810 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC15.6■□□□□ 0.09
PRAMEF4O60810 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC15.6■□□□□ 0.09
PRAMEF4O60810 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
PRAMEF4O60810 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 91.1 ms