Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC15.57■□□□□ 0.08
GFRA3O60609 AC132938.4-201ENST00000623835 848 ntBASIC15.57■□□□□ 0.08
GFRA3O60609 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC15.57■□□□□ 0.08
GFRA3O60609 AC006453.4-201ENST00000636949 1252 ntBASIC15.57■□□□□ 0.08
GFRA3O60609 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC15.57■□□□□ 0.08
GFRA3O60609 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
GFRA3O60609 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
GFRA3O60609 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC15.57■□□□□ 0.08
GFRA3O60609 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
GFRA3O60609 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
GFRA3O60609 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC15.57■□□□□ 0.08
GFRA3O60609 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
GFRA3O60609 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
GFRA3O60609 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC15.56■□□□□ 0.08
GFRA3O60609 NEFHP1-201ENST00000412845 2629 ntBASIC15.56■□□□□ 0.08
GFRA3O60609 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
GFRA3O60609 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
GFRA3O60609 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC15.56■□□□□ 0.08
GFRA3O60609 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC15.56■□□□□ 0.08
GFRA3O60609 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC15.56■□□□□ 0.08
GFRA3O60609 IDI2-AS1-201ENST00000420381 672 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
GFRA3O60609 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC15.56■□□□□ 0.08
GFRA3O60609 AL590640.2-201ENST00000457038 527 ntBASIC15.56■□□□□ 0.08
GFRA3O60609 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC15.56■□□□□ 0.08
GFRA3O60609 AC019193.1-201ENST00000506678 823 ntBASIC15.56■□□□□ 0.08
GFRA3O60609 RNA5SP486-201ENST00000515961 83 ntBASIC15.56■□□□□ 0.08
GFRA3O60609 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
GFRA3O60609 AL365223.1-201ENST00000574864 1297 ntBASIC15.56■□□□□ 0.08
GFRA3O60609 AC018761.2-201ENST00000585496 296 ntTSL 3 BASIC15.56■□□□□ 0.08
GFRA3O60609 WDR7-208ENST00000589935 544 ntTSL 4 BASIC15.56■□□□□ 0.08
GFRA3O60609 AL031665.1-201ENST00000619766 572 ntTSL 4 BASIC15.56■□□□□ 0.08
GFRA3O60609 RHD-203ENST00000357542 1387 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
GFRA3O60609 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
GFRA3O60609 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC15.56■□□□□ 0.08
GFRA3O60609 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
GFRA3O60609 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC15.56■□□□□ 0.08
GFRA3O60609 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC15.56■□□□□ 0.08
GFRA3O60609 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC15.56■□□□□ 0.08
GFRA3O60609 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC15.56■□□□□ 0.08
GFRA3O60609 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
GFRA3O60609 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
GFRA3O60609 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
GFRA3O60609 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
GFRA3O60609 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
GFRA3O60609 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
GFRA3O60609 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
GFRA3O60609 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
GFRA3O60609 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
GFRA3O60609 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
GFRA3O60609 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
GFRA3O60609 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC15.55■□□□□ 0.08
GFRA3O60609 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
GFRA3O60609 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
GFRA3O60609 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
GFRA3O60609 AL136982.4-201ENST00000437689 1740 ntBASIC15.55■□□□□ 0.08
GFRA3O60609 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
GFRA3O60609 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
GFRA3O60609 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
GFRA3O60609 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
GFRA3O60609 FAM69C-202ENST00000400291 1329 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
GFRA3O60609 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
GFRA3O60609 ACYP1-201ENST00000238618 627 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
GFRA3O60609 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
GFRA3O60609 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
GFRA3O60609 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
GFRA3O60609 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
GFRA3O60609 NDUFAB1P1-201ENST00000404262 460 ntBASIC15.55■□□□□ 0.08
GFRA3O60609 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
GFRA3O60609 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
GFRA3O60609 PFN2-202ENST00000423691 911 ntTSL 2 BASIC15.55■□□□□ 0.08
GFRA3O60609 AC011742.3-201ENST00000439053 820 ntBASIC15.55■□□□□ 0.08
GFRA3O60609 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC15.55■□□□□ 0.08
GFRA3O60609 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC15.55■□□□□ 0.08
GFRA3O60609 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
GFRA3O60609 FXYD2-205ENST00000528014 672 ntAPPRIS P1 TSL 3 BASIC15.55■□□□□ 0.08
GFRA3O60609 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC15.55■□□□□ 0.08
GFRA3O60609 PAM16-215ENST00000577031 548 ntTSL 4 BASIC15.55■□□□□ 0.08
GFRA3O60609 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC15.55■□□□□ 0.08
GFRA3O60609 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC15.55■□□□□ 0.08
GFRA3O60609 AC100757.4-201ENST00000626934 759 ntBASIC15.55■□□□□ 0.08
GFRA3O60609 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
GFRA3O60609 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC15.55■□□□□ 0.08
GFRA3O60609 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
GFRA3O60609 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC15.55■□□□□ 0.08
GFRA3O60609 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
GFRA3O60609 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
GFRA3O60609 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC15.55■□□□□ 0.08
GFRA3O60609 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC15.55■□□□□ 0.08
GFRA3O60609 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
GFRA3O60609 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC15.54■□□□□ 0.08
GFRA3O60609 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
GFRA3O60609 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
GFRA3O60609 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
GFRA3O60609 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
GFRA3O60609 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC15.54■□□□□ 0.08
GFRA3O60609 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
GFRA3O60609 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
GFRA3O60609 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
GFRA3O60609 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
GFRA3O60609 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 79.3 ms