Protein–RNA interactions for Protein: O43543

XRCC2, DNA repair protein XRCC2, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC2O43543 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
XRCC2O43543 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
XRCC2O43543 WASH6P-202ENST00000359512 1437 ntBASIC14.19□□□□□ -0.14
XRCC2O43543 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
XRCC2O43543 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
XRCC2O43543 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
XRCC2O43543 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
XRCC2O43543 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
XRCC2O43543 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
XRCC2O43543 KRT18P2-201ENST00000447938 1258 ntBASIC14.19□□□□□ -0.14
XRCC2O43543 KRT18P3-201ENST00000451602 1288 ntBASIC14.19□□□□□ -0.14
XRCC2O43543 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC14.19□□□□□ -0.14
XRCC2O43543 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
XRCC2O43543 PIN1-206ENST00000587625 878 ntTSL 2 BASIC14.19□□□□□ -0.14
XRCC2O43543 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
XRCC2O43543 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC14.19□□□□□ -0.14
XRCC2O43543 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
XRCC2O43543 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
XRCC2O43543 AC016027.1-202ENST00000607927 1699 ntBASIC14.19□□□□□ -0.14
XRCC2O43543 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
XRCC2O43543 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
XRCC2O43543 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
XRCC2O43543 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
XRCC2O43543 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
XRCC2O43543 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
XRCC2O43543 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC14.19□□□□□ -0.14
XRCC2O43543 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
XRCC2O43543 AL513477.1-201ENST00000602865 2407 ntBASIC14.19□□□□□ -0.14
XRCC2O43543 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
XRCC2O43543 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
XRCC2O43543 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
XRCC2O43543 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
XRCC2O43543 NORAD-201ENST00000565493 5339 ntBASIC14.18□□□□□ -0.14
XRCC2O43543 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
XRCC2O43543 BANP-201ENST00000286122 2368 ntTSL 5 BASIC14.18□□□□□ -0.14
XRCC2O43543 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
XRCC2O43543 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
XRCC2O43543 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
XRCC2O43543 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
XRCC2O43543 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
XRCC2O43543 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC14.18□□□□□ -0.14
XRCC2O43543 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
XRCC2O43543 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
XRCC2O43543 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
XRCC2O43543 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
XRCC2O43543 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC14.18□□□□□ -0.14
XRCC2O43543 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
XRCC2O43543 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
XRCC2O43543 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
XRCC2O43543 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC14.18□□□□□ -0.14
XRCC2O43543 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
XRCC2O43543 TEX30-205ENST00000376029 959 ntTSL 2 BASIC14.18□□□□□ -0.14
XRCC2O43543 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
XRCC2O43543 AC026396.1-201ENST00000419388 421 ntBASIC14.18□□□□□ -0.14
XRCC2O43543 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
XRCC2O43543 AC093724.1-201ENST00000448659 1027 ntBASIC14.18□□□□□ -0.14
XRCC2O43543 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC14.18□□□□□ -0.14
XRCC2O43543 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
XRCC2O43543 AC140113.2-201ENST00000604370 208 ntBASIC14.18□□□□□ -0.14
XRCC2O43543 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC14.18□□□□□ -0.14
XRCC2O43543 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
XRCC2O43543 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC14.18□□□□□ -0.14
XRCC2O43543 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
XRCC2O43543 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
XRCC2O43543 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
XRCC2O43543 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
XRCC2O43543 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
XRCC2O43543 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
XRCC2O43543 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC14.18□□□□□ -0.14
XRCC2O43543 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
XRCC2O43543 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC14.18□□□□□ -0.14
XRCC2O43543 NID2-208ENST00000617139 3827 ntTSL 5 BASIC14.18□□□□□ -0.14
XRCC2O43543 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
XRCC2O43543 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC14.18□□□□□ -0.14
XRCC2O43543 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
XRCC2O43543 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC14.18□□□□□ -0.14
XRCC2O43543 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
XRCC2O43543 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
XRCC2O43543 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
XRCC2O43543 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
XRCC2O43543 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC14.17□□□□□ -0.14
XRCC2O43543 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
XRCC2O43543 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
XRCC2O43543 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
XRCC2O43543 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
XRCC2O43543 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
XRCC2O43543 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
XRCC2O43543 BLK-205ENST00000529894 2017 ntTSL 5 BASIC14.17□□□□□ -0.14
XRCC2O43543 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
XRCC2O43543 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
XRCC2O43543 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
XRCC2O43543 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
XRCC2O43543 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC14.17□□□□□ -0.14
XRCC2O43543 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
XRCC2O43543 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
XRCC2O43543 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
XRCC2O43543 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
XRCC2O43543 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
XRCC2O43543 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
XRCC2O43543 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms