Protein–RNA interactions for Protein: O00206

TLR4, Toll-like receptor 4, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR4O00206 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC16.09■□□□□ 0.17
TLR4O00206 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC16.09■□□□□ 0.17
TLR4O00206 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
TLR4O00206 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TLR4O00206 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
TLR4O00206 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC16.09■□□□□ 0.17
TLR4O00206 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TLR4O00206 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
TLR4O00206 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC16.09■□□□□ 0.17
TLR4O00206 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TLR4O00206 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
TLR4O00206 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TLR4O00206 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC16.09■□□□□ 0.17
TLR4O00206 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
TLR4O00206 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TLR4O00206 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
TLR4O00206 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TLR4O00206 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
TLR4O00206 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TLR4O00206 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TLR4O00206 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TLR4O00206 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TLR4O00206 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
TLR4O00206 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.17
TLR4O00206 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
TLR4O00206 OS9-205ENST00000413095 1660 ntTSL 2 BASIC16.08■□□□□ 0.17
TLR4O00206 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
TLR4O00206 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC16.08■□□□□ 0.17
TLR4O00206 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.17
TLR4O00206 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
TLR4O00206 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
TLR4O00206 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC16.08■□□□□ 0.17
TLR4O00206 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.17
TLR4O00206 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.17
TLR4O00206 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC16.08■□□□□ 0.16
TLR4O00206 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
TLR4O00206 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TLR4O00206 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
TLR4O00206 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
TLR4O00206 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
TLR4O00206 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TLR4O00206 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
TLR4O00206 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TLR4O00206 KRT17P7-201ENST00000451704 1104 ntBASIC16.08■□□□□ 0.16
TLR4O00206 SERBP1P3-201ENST00000459980 809 ntBASIC16.08■□□□□ 0.16
TLR4O00206 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC16.08■□□□□ 0.16
TLR4O00206 API5-211ENST00000534695 560 ntTSL 5 BASIC16.08■□□□□ 0.16
TLR4O00206 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC16.08■□□□□ 0.16
TLR4O00206 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC16.08■□□□□ 0.16
TLR4O00206 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC16.08■□□□□ 0.16
TLR4O00206 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC16.08■□□□□ 0.16
TLR4O00206 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC16.08■□□□□ 0.16
TLR4O00206 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
TLR4O00206 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
TLR4O00206 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
TLR4O00206 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC16.08■□□□□ 0.16
TLR4O00206 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TLR4O00206 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TLR4O00206 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TLR4O00206 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TLR4O00206 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC16.08■□□□□ 0.16
TLR4O00206 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
TLR4O00206 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TLR4O00206 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TLR4O00206 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
TLR4O00206 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC16.08■□□□□ 0.16
TLR4O00206 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
TLR4O00206 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TLR4O00206 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TLR4O00206 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TLR4O00206 AL031731.1-201ENST00000642131 2094 ntBASIC16.07■□□□□ 0.16
TLR4O00206 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TLR4O00206 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TLR4O00206 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC16.07■□□□□ 0.16
TLR4O00206 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TLR4O00206 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
TLR4O00206 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TLR4O00206 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TLR4O00206 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TLR4O00206 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC16.07■□□□□ 0.16
TLR4O00206 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TLR4O00206 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TLR4O00206 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
TLR4O00206 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TLR4O00206 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
TLR4O00206 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
TLR4O00206 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TLR4O00206 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TLR4O00206 PTPA-220ENST00000436883 532 ntTSL 4 BASIC16.07■□□□□ 0.16
TLR4O00206 GNAQP1-201ENST00000444815 1067 ntBASIC16.07■□□□□ 0.16
TLR4O00206 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC16.07■□□□□ 0.16
TLR4O00206 AL512361.1-201ENST00000554200 418 ntBASIC16.07■□□□□ 0.16
TLR4O00206 AC010336.2-201ENST00000564226 506 ntBASIC16.07■□□□□ 0.16
TLR4O00206 AC140912.1-201ENST00000577171 1054 ntBASIC16.07■□□□□ 0.16
TLR4O00206 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC16.07■□□□□ 0.16
TLR4O00206 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC16.07■□□□□ 0.16
TLR4O00206 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC16.07■□□□□ 0.16
TLR4O00206 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC16.07■□□□□ 0.16
TLR4O00206 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
TLR4O00206 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC16.07■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms