Protein–RNA interactions for Protein: E9PGA6

C1QTNF3-AMACR, C1QTNF3-AMACR readthrough (NMD candidate), humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C1QTNF3-AMACRE9PGA6 CRB3P1-201ENST00000449338 276 ntBASIC16.22■□□□□ 0.19
C1QTNF3-AMACRE9PGA6 SDHAP3-202ENST00000515467 728 ntBASIC16.22■□□□□ 0.19
C1QTNF3-AMACRE9PGA6 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC16.22■□□□□ 0.19
C1QTNF3-AMACRE9PGA6 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
C1QTNF3-AMACRE9PGA6 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC16.22■□□□□ 0.19
C1QTNF3-AMACRE9PGA6 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC16.22■□□□□ 0.19
C1QTNF3-AMACRE9PGA6 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC16.22■□□□□ 0.19
C1QTNF3-AMACRE9PGA6 AC243562.2-201ENST00000561247 970 ntBASIC16.22■□□□□ 0.19
C1QTNF3-AMACRE9PGA6 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC16.22■□□□□ 0.19
C1QTNF3-AMACRE9PGA6 RNA5-8SN1-201ENST00000610460 153 ntBASIC16.22■□□□□ 0.19
C1QTNF3-AMACRE9PGA6 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC16.22■□□□□ 0.19
C1QTNF3-AMACRE9PGA6 RNA5-8SN5-202ENST00000612463 153 ntBASIC16.22■□□□□ 0.19
C1QTNF3-AMACRE9PGA6 RNA5-8SN4-201ENST00000613359 153 ntBASIC16.22■□□□□ 0.19
C1QTNF3-AMACRE9PGA6 RNA5-8SN5-201ENST00000619471 153 ntBASIC16.22■□□□□ 0.19
C1QTNF3-AMACRE9PGA6 AF228730.6-201ENST00000641497 218 ntBASIC16.22■□□□□ 0.19
C1QTNF3-AMACRE9PGA6 AC084121.3-201ENST00000641716 218 ntBASIC16.22■□□□□ 0.19
C1QTNF3-AMACRE9PGA6 AC105233.6-201ENST00000642093 218 ntBASIC16.22■□□□□ 0.19
C1QTNF3-AMACRE9PGA6 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
C1QTNF3-AMACRE9PGA6 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC16.22■□□□□ 0.19
C1QTNF3-AMACRE9PGA6 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
C1QTNF3-AMACRE9PGA6 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
C1QTNF3-AMACRE9PGA6 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
C1QTNF3-AMACRE9PGA6 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
C1QTNF3-AMACRE9PGA6 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
C1QTNF3-AMACRE9PGA6 ME2P1-201ENST00000426028 1970 ntBASIC16.22■□□□□ 0.19
C1QTNF3-AMACRE9PGA6 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
C1QTNF3-AMACRE9PGA6 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
C1QTNF3-AMACRE9PGA6 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC16.21■□□□□ 0.19
C1QTNF3-AMACRE9PGA6 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
C1QTNF3-AMACRE9PGA6 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
C1QTNF3-AMACRE9PGA6 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
C1QTNF3-AMACRE9PGA6 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC16.21■□□□□ 0.19
C1QTNF3-AMACRE9PGA6 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
C1QTNF3-AMACRE9PGA6 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC16.21■□□□□ 0.19
C1QTNF3-AMACRE9PGA6 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
C1QTNF3-AMACRE9PGA6 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC16.21■□□□□ 0.19
C1QTNF3-AMACRE9PGA6 REXO1L8P-201ENST00000604378 1897 ntBASIC16.21■□□□□ 0.19
C1QTNF3-AMACRE9PGA6 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
C1QTNF3-AMACRE9PGA6 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
C1QTNF3-AMACRE9PGA6 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
C1QTNF3-AMACRE9PGA6 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
C1QTNF3-AMACRE9PGA6 CALY-202ENST00000368555 783 ntTSL 2 BASIC16.21■□□□□ 0.19
C1QTNF3-AMACRE9PGA6 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
C1QTNF3-AMACRE9PGA6 FO393414.2-201ENST00000405153 598 ntBASIC16.21■□□□□ 0.19
C1QTNF3-AMACRE9PGA6 TMPRSS11CP-201ENST00000453277 683 ntBASIC16.21■□□□□ 0.19
C1QTNF3-AMACRE9PGA6 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC16.21■□□□□ 0.19
C1QTNF3-AMACRE9PGA6 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC16.21■□□□□ 0.19
C1QTNF3-AMACRE9PGA6 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC16.21■□□□□ 0.19
C1QTNF3-AMACRE9PGA6 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
C1QTNF3-AMACRE9PGA6 AC044860.1-202ENST00000559481 777 ntBASIC16.21■□□□□ 0.19
C1QTNF3-AMACRE9PGA6 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC16.21■□□□□ 0.19
C1QTNF3-AMACRE9PGA6 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC16.21■□□□□ 0.19
C1QTNF3-AMACRE9PGA6 AC004840.1-201ENST00000636359 365 ntBASIC16.21■□□□□ 0.19
C1QTNF3-AMACRE9PGA6 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC16.21■□□□□ 0.19
C1QTNF3-AMACRE9PGA6 AL136982.4-201ENST00000437689 1740 ntBASIC16.21■□□□□ 0.19
C1QTNF3-AMACRE9PGA6 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
C1QTNF3-AMACRE9PGA6 AD000864.1-201ENST00000624076 2295 ntBASIC16.21■□□□□ 0.19
C1QTNF3-AMACRE9PGA6 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
C1QTNF3-AMACRE9PGA6 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
C1QTNF3-AMACRE9PGA6 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
C1QTNF3-AMACRE9PGA6 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
C1QTNF3-AMACRE9PGA6 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
C1QTNF3-AMACRE9PGA6 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
C1QTNF3-AMACRE9PGA6 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
C1QTNF3-AMACRE9PGA6 OS9-205ENST00000413095 1660 ntTSL 2 BASIC16.21■□□□□ 0.18
C1QTNF3-AMACRE9PGA6 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
C1QTNF3-AMACRE9PGA6 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
C1QTNF3-AMACRE9PGA6 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
C1QTNF3-AMACRE9PGA6 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
C1QTNF3-AMACRE9PGA6 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC16.21■□□□□ 0.18
C1QTNF3-AMACRE9PGA6 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
C1QTNF3-AMACRE9PGA6 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC16.2■□□□□ 0.18
C1QTNF3-AMACRE9PGA6 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
C1QTNF3-AMACRE9PGA6 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC16.2■□□□□ 0.18
C1QTNF3-AMACRE9PGA6 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
C1QTNF3-AMACRE9PGA6 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
C1QTNF3-AMACRE9PGA6 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
C1QTNF3-AMACRE9PGA6 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
C1QTNF3-AMACRE9PGA6 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
C1QTNF3-AMACRE9PGA6 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
C1QTNF3-AMACRE9PGA6 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC16.2■□□□□ 0.18
C1QTNF3-AMACRE9PGA6 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC16.2■□□□□ 0.18
C1QTNF3-AMACRE9PGA6 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
C1QTNF3-AMACRE9PGA6 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
C1QTNF3-AMACRE9PGA6 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
C1QTNF3-AMACRE9PGA6 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
C1QTNF3-AMACRE9PGA6 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC16.2■□□□□ 0.18
C1QTNF3-AMACRE9PGA6 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
C1QTNF3-AMACRE9PGA6 AC004987.2-201ENST00000395959 1148 ntBASIC16.2■□□□□ 0.18
C1QTNF3-AMACRE9PGA6 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
C1QTNF3-AMACRE9PGA6 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC16.2■□□□□ 0.18
C1QTNF3-AMACRE9PGA6 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
C1QTNF3-AMACRE9PGA6 FXR1-221ENST00000491674 365 ntTSL 2 BASIC16.2■□□□□ 0.18
C1QTNF3-AMACRE9PGA6 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
C1QTNF3-AMACRE9PGA6 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC16.2■□□□□ 0.18
C1QTNF3-AMACRE9PGA6 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
C1QTNF3-AMACRE9PGA6 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
C1QTNF3-AMACRE9PGA6 AC104794.3-201ENST00000566840 1248 ntBASIC16.2■□□□□ 0.18
C1QTNF3-AMACRE9PGA6 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC16.2■□□□□ 0.18
C1QTNF3-AMACRE9PGA6 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms