Protein–RNA interactions for Protein: A6NNA2

SRRM3, Serine/arginine repetitive matrix protein 3, humanhuman

Predicted RBP Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM3A6NNA2 FUT8-AS1-201ENST00000621019 1521 ntBASIC16.91■□□□□ 0.3
SRRM3A6NNA2 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
SRRM3A6NNA2 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
SRRM3A6NNA2 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC16.9■□□□□ 0.3
SRRM3A6NNA2 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC16.9■□□□□ 0.3
SRRM3A6NNA2 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
SRRM3A6NNA2 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SRRM3A6NNA2 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SRRM3A6NNA2 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SRRM3A6NNA2 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SRRM3A6NNA2 CRYGEP-201ENST00000412192 528 ntBASIC16.9■□□□□ 0.3
SRRM3A6NNA2 PMS2P4-201ENST00000412466 1052 ntBASIC16.9■□□□□ 0.3
SRRM3A6NNA2 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SRRM3A6NNA2 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SRRM3A6NNA2 AC025678.2-201ENST00000562061 970 ntBASIC16.9■□□□□ 0.3
SRRM3A6NNA2 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
SRRM3A6NNA2 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SRRM3A6NNA2 AL359881.2-201ENST00000602973 570 ntBASIC16.9■□□□□ 0.3
SRRM3A6NNA2 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC16.9■□□□□ 0.3
SRRM3A6NNA2 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
SRRM3A6NNA2 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
SRRM3A6NNA2 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SRRM3A6NNA2 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
SRRM3A6NNA2 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
SRRM3A6NNA2 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SRRM3A6NNA2 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SRRM3A6NNA2 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SRRM3A6NNA2 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SRRM3A6NNA2 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SRRM3A6NNA2 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SRRM3A6NNA2 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SRRM3A6NNA2 LCK-206ENST00000373564 2137 ntTSL 5 BASIC16.9■□□□□ 0.3
SRRM3A6NNA2 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SRRM3A6NNA2 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC16.9■□□□□ 0.3
SRRM3A6NNA2 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
SRRM3A6NNA2 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SRRM3A6NNA2 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC16.89■□□□□ 0.29
SRRM3A6NNA2 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SRRM3A6NNA2 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC16.89■□□□□ 0.29
SRRM3A6NNA2 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SRRM3A6NNA2 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SRRM3A6NNA2 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC16.89■□□□□ 0.29
SRRM3A6NNA2 WARS-232ENST00000556645 2508 ntTSL 5 BASIC16.89■□□□□ 0.29
SRRM3A6NNA2 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
SRRM3A6NNA2 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
SRRM3A6NNA2 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC16.89■□□□□ 0.29
SRRM3A6NNA2 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC16.89■□□□□ 0.29
SRRM3A6NNA2 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC16.89■□□□□ 0.29
SRRM3A6NNA2 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC16.89■□□□□ 0.29
SRRM3A6NNA2 MEIS3P1-201ENST00000495167 958 ntBASIC16.89■□□□□ 0.29
SRRM3A6NNA2 MAL2-202ENST00000531508 892 ntTSL 3 BASIC16.89■□□□□ 0.29
SRRM3A6NNA2 POLD4-211ENST00000539074 714 ntTSL 3 BASIC16.89■□□□□ 0.29
SRRM3A6NNA2 AC006557.2-201ENST00000592985 1240 ntBASIC16.89■□□□□ 0.29
SRRM3A6NNA2 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC16.89■□□□□ 0.29
SRRM3A6NNA2 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC16.89■□□□□ 0.29
SRRM3A6NNA2 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SRRM3A6NNA2 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SRRM3A6NNA2 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SRRM3A6NNA2 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
SRRM3A6NNA2 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
SRRM3A6NNA2 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
SRRM3A6NNA2 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
SRRM3A6NNA2 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
SRRM3A6NNA2 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
SRRM3A6NNA2 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
SRRM3A6NNA2 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SRRM3A6NNA2 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SRRM3A6NNA2 GOLGA6L17P-202ENST00000614358 1398 ntBASIC16.89■□□□□ 0.29
SRRM3A6NNA2 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
SRRM3A6NNA2 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
SRRM3A6NNA2 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC16.88■□□□□ 0.29
SRRM3A6NNA2 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SRRM3A6NNA2 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SRRM3A6NNA2 LINC02447-202ENST00000501888 2146 ntBASIC16.88■□□□□ 0.29
SRRM3A6NNA2 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
SRRM3A6NNA2 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC16.88■□□□□ 0.29
SRRM3A6NNA2 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC16.88■□□□□ 0.29
SRRM3A6NNA2 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SRRM3A6NNA2 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
SRRM3A6NNA2 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC16.88■□□□□ 0.29
SRRM3A6NNA2 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC16.88■□□□□ 0.29
SRRM3A6NNA2 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
SRRM3A6NNA2 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SRRM3A6NNA2 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC16.88■□□□□ 0.29
SRRM3A6NNA2 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC16.88■□□□□ 0.29
SRRM3A6NNA2 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
SRRM3A6NNA2 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SRRM3A6NNA2 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
SRRM3A6NNA2 AC073621.1-201ENST00000392730 636 ntBASIC16.88■□□□□ 0.29
SRRM3A6NNA2 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC16.88■□□□□ 0.29
SRRM3A6NNA2 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC16.88■□□□□ 0.29
SRRM3A6NNA2 PON3-205ENST00000451904 1053 ntTSL 3 BASIC16.88■□□□□ 0.29
SRRM3A6NNA2 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
SRRM3A6NNA2 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC16.88■□□□□ 0.29
SRRM3A6NNA2 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC16.88■□□□□ 0.29
SRRM3A6NNA2 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
SRRM3A6NNA2 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
SRRM3A6NNA2 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC16.88■□□□□ 0.29
SRRM3A6NNA2 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SRRM3A6NNA2 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms