Protein–RNA interactions for Protein: A6NCL2

LRCOL1, Leucine-rich colipase-like protein 1, humanhuman

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCOL1A6NCL2 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
LRCOL1A6NCL2 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
LRCOL1A6NCL2 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
LRCOL1A6NCL2 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
LRCOL1A6NCL2 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
LRCOL1A6NCL2 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
LRCOL1A6NCL2 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC10.95□□□□□ -0.66
LRCOL1A6NCL2 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
LRCOL1A6NCL2 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC10.95□□□□□ -0.66
LRCOL1A6NCL2 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC10.95□□□□□ -0.66
LRCOL1A6NCL2 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
LRCOL1A6NCL2 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
LRCOL1A6NCL2 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC10.95□□□□□ -0.66
LRCOL1A6NCL2 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
LRCOL1A6NCL2 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC10.95□□□□□ -0.66
LRCOL1A6NCL2 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
LRCOL1A6NCL2 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
LRCOL1A6NCL2 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
LRCOL1A6NCL2 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
LRCOL1A6NCL2 KRT8P39-201ENST00000396270 1433 ntBASIC10.95□□□□□ -0.66
LRCOL1A6NCL2 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
LRCOL1A6NCL2 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
LRCOL1A6NCL2 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
LRCOL1A6NCL2 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC10.95□□□□□ -0.66
LRCOL1A6NCL2 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
LRCOL1A6NCL2 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
LRCOL1A6NCL2 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
LRCOL1A6NCL2 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
LRCOL1A6NCL2 MIR346-201ENST00000362234 95 ntBASIC10.95□□□□□ -0.66
LRCOL1A6NCL2 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
LRCOL1A6NCL2 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
LRCOL1A6NCL2 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
LRCOL1A6NCL2 RPL30-202ENST00000396070 440 ntTSL 2 BASIC10.95□□□□□ -0.66
LRCOL1A6NCL2 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
LRCOL1A6NCL2 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC10.95□□□□□ -0.66
LRCOL1A6NCL2 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC10.95□□□□□ -0.66
LRCOL1A6NCL2 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC10.95□□□□□ -0.66
LRCOL1A6NCL2 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC10.95□□□□□ -0.66
LRCOL1A6NCL2 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC10.95□□□□□ -0.66
LRCOL1A6NCL2 KRT18P34-201ENST00000488218 1270 ntBASIC10.95□□□□□ -0.66
LRCOL1A6NCL2 SLBP-205ENST00000488267 987 ntTSL 2 BASIC10.95□□□□□ -0.66
LRCOL1A6NCL2 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC10.95□□□□□ -0.66
LRCOL1A6NCL2 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC10.95□□□□□ -0.66
LRCOL1A6NCL2 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC10.95□□□□□ -0.66
LRCOL1A6NCL2 AL138918.1-201ENST00000568306 659 ntBASIC10.95□□□□□ -0.66
LRCOL1A6NCL2 AP000842.3-202ENST00000569238 1080 ntBASIC10.95□□□□□ -0.66
LRCOL1A6NCL2 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
LRCOL1A6NCL2 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
LRCOL1A6NCL2 AP001059.3-201ENST00000619053 235 ntBASIC10.95□□□□□ -0.66
LRCOL1A6NCL2 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC10.95□□□□□ -0.66
LRCOL1A6NCL2 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC10.95□□□□□ -0.66
LRCOL1A6NCL2 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
LRCOL1A6NCL2 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC10.95□□□□□ -0.66
LRCOL1A6NCL2 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
LRCOL1A6NCL2 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
LRCOL1A6NCL2 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC10.95□□□□□ -0.66
LRCOL1A6NCL2 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
LRCOL1A6NCL2 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC10.95□□□□□ -0.66
LRCOL1A6NCL2 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
LRCOL1A6NCL2 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC10.95□□□□□ -0.66
LRCOL1A6NCL2 NID2-208ENST00000617139 3827 ntTSL 5 BASIC10.95□□□□□ -0.66
LRCOL1A6NCL2 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC10.95□□□□□ -0.66
LRCOL1A6NCL2 PC-204ENST00000524491 1714 ntTSL 2 BASIC10.95□□□□□ -0.66
LRCOL1A6NCL2 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC10.95□□□□□ -0.66
LRCOL1A6NCL2 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
LRCOL1A6NCL2 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC10.95□□□□□ -0.66
LRCOL1A6NCL2 NARF-206ENST00000457415 1668 ntTSL 5 BASIC10.95□□□□□ -0.66
LRCOL1A6NCL2 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
LRCOL1A6NCL2 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
LRCOL1A6NCL2 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
LRCOL1A6NCL2 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC10.95□□□□□ -0.66
LRCOL1A6NCL2 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC10.95□□□□□ -0.66
LRCOL1A6NCL2 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
LRCOL1A6NCL2 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC10.95□□□□□ -0.66
LRCOL1A6NCL2 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC10.95□□□□□ -0.66
LRCOL1A6NCL2 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
LRCOL1A6NCL2 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
LRCOL1A6NCL2 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
LRCOL1A6NCL2 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
LRCOL1A6NCL2 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
LRCOL1A6NCL2 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
LRCOL1A6NCL2 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
LRCOL1A6NCL2 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC10.94□□□□□ -0.66
LRCOL1A6NCL2 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
LRCOL1A6NCL2 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC10.94□□□□□ -0.66
LRCOL1A6NCL2 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
LRCOL1A6NCL2 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
LRCOL1A6NCL2 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
LRCOL1A6NCL2 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC10.94□□□□□ -0.66
LRCOL1A6NCL2 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC10.94□□□□□ -0.66
LRCOL1A6NCL2 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
LRCOL1A6NCL2 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
LRCOL1A6NCL2 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
LRCOL1A6NCL2 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
LRCOL1A6NCL2 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC10.94□□□□□ -0.66
LRCOL1A6NCL2 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
LRCOL1A6NCL2 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC10.94□□□□□ -0.66
LRCOL1A6NCL2 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC10.94□□□□□ -0.66
LRCOL1A6NCL2 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
LRCOL1A6NCL2 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms