Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC12.7□□□□□ -0.38
TRAV5A0A0B4J249 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC12.7□□□□□ -0.38
TRAV5A0A0B4J249 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC12.7□□□□□ -0.38
TRAV5A0A0B4J249 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC12.7□□□□□ -0.38
TRAV5A0A0B4J249 MTDHP4-201ENST00000600287 670 ntBASIC12.7□□□□□ -0.38
TRAV5A0A0B4J249 AC069148.1-201ENST00000608741 768 ntBASIC12.7□□□□□ -0.38
TRAV5A0A0B4J249 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
TRAV5A0A0B4J249 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TRAV5A0A0B4J249 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
TRAV5A0A0B4J249 AL592424.1-201ENST00000563624 1536 ntBASIC12.7□□□□□ -0.38
TRAV5A0A0B4J249 SSR4P1-203ENST00000599569 2260 ntBASIC12.7□□□□□ -0.38
TRAV5A0A0B4J249 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC12.7□□□□□ -0.38
TRAV5A0A0B4J249 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TRAV5A0A0B4J249 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC12.7□□□□□ -0.38
TRAV5A0A0B4J249 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC12.7□□□□□ -0.38
TRAV5A0A0B4J249 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TRAV5A0A0B4J249 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TRAV5A0A0B4J249 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
TRAV5A0A0B4J249 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC12.7□□□□□ -0.38
TRAV5A0A0B4J249 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
TRAV5A0A0B4J249 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
TRAV5A0A0B4J249 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TRAV5A0A0B4J249 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
TRAV5A0A0B4J249 PGR-210ENST00000619228 3038 ntTSL 5 BASIC12.7□□□□□ -0.38
TRAV5A0A0B4J249 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TRAV5A0A0B4J249 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC12.69□□□□□ -0.38
TRAV5A0A0B4J249 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
TRAV5A0A0B4J249 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC12.69□□□□□ -0.38
TRAV5A0A0B4J249 SLC9A3P2-201ENST00000447821 2021 ntBASIC12.69□□□□□ -0.38
TRAV5A0A0B4J249 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC12.69□□□□□ -0.38
TRAV5A0A0B4J249 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TRAV5A0A0B4J249 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TRAV5A0A0B4J249 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TRAV5A0A0B4J249 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
TRAV5A0A0B4J249 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
TRAV5A0A0B4J249 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
TRAV5A0A0B4J249 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TRAV5A0A0B4J249 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
TRAV5A0A0B4J249 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
TRAV5A0A0B4J249 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TRAV5A0A0B4J249 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
TRAV5A0A0B4J249 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC12.69□□□□□ -0.38
TRAV5A0A0B4J249 ARTN-206ENST00000472435 402 ntTSL 3 BASIC12.69□□□□□ -0.38
TRAV5A0A0B4J249 FOSL1P1-201ENST00000511041 816 ntBASIC12.69□□□□□ -0.38
TRAV5A0A0B4J249 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC12.69□□□□□ -0.38
TRAV5A0A0B4J249 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
TRAV5A0A0B4J249 SART3-203ENST00000546611 1184 ntBASIC12.69□□□□□ -0.38
TRAV5A0A0B4J249 RNF151-202ENST00000569210 853 ntTSL 2 BASIC12.69□□□□□ -0.38
TRAV5A0A0B4J249 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
TRAV5A0A0B4J249 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC12.69□□□□□ -0.38
TRAV5A0A0B4J249 WT1-AS_2.1-201ENST00000613208 137 ntBASIC12.69□□□□□ -0.38
TRAV5A0A0B4J249 BSG-214ENST00000614867 960 ntTSL 3 BASIC12.69□□□□□ -0.38
TRAV5A0A0B4J249 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC12.69□□□□□ -0.38
TRAV5A0A0B4J249 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC12.69□□□□□ -0.38
TRAV5A0A0B4J249 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
TRAV5A0A0B4J249 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TRAV5A0A0B4J249 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
TRAV5A0A0B4J249 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TRAV5A0A0B4J249 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TRAV5A0A0B4J249 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
TRAV5A0A0B4J249 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
TRAV5A0A0B4J249 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TRAV5A0A0B4J249 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC12.69□□□□□ -0.38
TRAV5A0A0B4J249 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
TRAV5A0A0B4J249 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
TRAV5A0A0B4J249 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TRAV5A0A0B4J249 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC12.69□□□□□ -0.38
TRAV5A0A0B4J249 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
TRAV5A0A0B4J249 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC12.68□□□□□ -0.38
TRAV5A0A0B4J249 DKFZP434H168-201ENST00000567381 1905 ntBASIC12.68□□□□□ -0.38
TRAV5A0A0B4J249 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
TRAV5A0A0B4J249 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TRAV5A0A0B4J249 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC12.68□□□□□ -0.38
TRAV5A0A0B4J249 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TRAV5A0A0B4J249 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
TRAV5A0A0B4J249 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
TRAV5A0A0B4J249 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
TRAV5A0A0B4J249 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC12.68□□□□□ -0.38
TRAV5A0A0B4J249 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
TRAV5A0A0B4J249 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
TRAV5A0A0B4J249 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC12.68□□□□□ -0.38
TRAV5A0A0B4J249 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
TRAV5A0A0B4J249 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC12.68□□□□□ -0.38
TRAV5A0A0B4J249 EMD-201ENST00000369835 966 ntTSL 3 BASIC12.68□□□□□ -0.38
TRAV5A0A0B4J249 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC12.68□□□□□ -0.38
TRAV5A0A0B4J249 RBM17P3-201ENST00000417687 1192 ntBASIC12.68□□□□□ -0.38
TRAV5A0A0B4J249 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC12.68□□□□□ -0.38
TRAV5A0A0B4J249 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC12.68□□□□□ -0.38
TRAV5A0A0B4J249 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC12.68□□□□□ -0.38
TRAV5A0A0B4J249 RPS15-207ENST00000591032 550 ntTSL 3 BASIC12.68□□□□□ -0.38
TRAV5A0A0B4J249 RPS15-212ENST00000593052 629 ntTSL 2 BASIC12.68□□□□□ -0.38
TRAV5A0A0B4J249 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TRAV5A0A0B4J249 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC12.68□□□□□ -0.38
TRAV5A0A0B4J249 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC12.68□□□□□ -0.38
TRAV5A0A0B4J249 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TRAV5A0A0B4J249 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
TRAV5A0A0B4J249 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
TRAV5A0A0B4J249 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TRAV5A0A0B4J249 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC12.68□□□□□ -0.38
TRAV5A0A0B4J249 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC12.68□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 56.7 ms