Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
CCDC187A0A096LP49 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC15.33■□□□□ 0.04
CCDC187A0A096LP49 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CCDC187A0A096LP49 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CCDC187A0A096LP49 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CCDC187A0A096LP49 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
CCDC187A0A096LP49 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC15.33■□□□□ 0.04
CCDC187A0A096LP49 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CCDC187A0A096LP49 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CCDC187A0A096LP49 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CCDC187A0A096LP49 AC005622.1-201ENST00000636801 1703 ntBASIC15.32■□□□□ 0.04
CCDC187A0A096LP49 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
CCDC187A0A096LP49 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCDC187A0A096LP49 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCDC187A0A096LP49 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCDC187A0A096LP49 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCDC187A0A096LP49 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCDC187A0A096LP49 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
CCDC187A0A096LP49 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CCDC187A0A096LP49 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CCDC187A0A096LP49 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC15.32■□□□□ 0.04
CCDC187A0A096LP49 AC092552.1-201ENST00000547243 906 ntBASIC15.32■□□□□ 0.04
CCDC187A0A096LP49 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC15.32■□□□□ 0.04
CCDC187A0A096LP49 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC15.32■□□□□ 0.04
CCDC187A0A096LP49 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC15.32■□□□□ 0.04
CCDC187A0A096LP49 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC15.32■□□□□ 0.04
CCDC187A0A096LP49 PFAS-212ENST00000625942 396 ntTSL 5 BASIC15.32■□□□□ 0.04
CCDC187A0A096LP49 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
CCDC187A0A096LP49 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCDC187A0A096LP49 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC15.32■□□□□ 0.04
CCDC187A0A096LP49 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
CCDC187A0A096LP49 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
CCDC187A0A096LP49 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCDC187A0A096LP49 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC15.32■□□□□ 0.04
CCDC187A0A096LP49 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CCDC187A0A096LP49 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCDC187A0A096LP49 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC15.32■□□□□ 0.04
CCDC187A0A096LP49 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC15.32■□□□□ 0.04
CCDC187A0A096LP49 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CCDC187A0A096LP49 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
CCDC187A0A096LP49 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCDC187A0A096LP49 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CCDC187A0A096LP49 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCDC187A0A096LP49 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCDC187A0A096LP49 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
CCDC187A0A096LP49 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCDC187A0A096LP49 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCDC187A0A096LP49 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCDC187A0A096LP49 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
CCDC187A0A096LP49 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
CCDC187A0A096LP49 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCDC187A0A096LP49 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CCDC187A0A096LP49 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCDC187A0A096LP49 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCDC187A0A096LP49 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
CCDC187A0A096LP49 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCDC187A0A096LP49 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CCDC187A0A096LP49 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCDC187A0A096LP49 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCDC187A0A096LP49 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCDC187A0A096LP49 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC15.31■□□□□ 0.04
CCDC187A0A096LP49 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCDC187A0A096LP49 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCDC187A0A096LP49 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCDC187A0A096LP49 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CCDC187A0A096LP49 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCDC187A0A096LP49 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCDC187A0A096LP49 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC15.31■□□□□ 0.04
CCDC187A0A096LP49 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CCDC187A0A096LP49 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC15.31■□□□□ 0.04
CCDC187A0A096LP49 HIST3H2BA-201ENST00000436555 524 ntBASIC15.31■□□□□ 0.04
CCDC187A0A096LP49 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC15.31■□□□□ 0.04
CCDC187A0A096LP49 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC15.31■□□□□ 0.04
CCDC187A0A096LP49 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC15.31■□□□□ 0.04
CCDC187A0A096LP49 AC119751.2-201ENST00000504529 210 ntBASIC15.31■□□□□ 0.04
CCDC187A0A096LP49 AC104989.1-201ENST00000519711 778 ntBASIC15.31■□□□□ 0.04
CCDC187A0A096LP49 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC15.31■□□□□ 0.04
CCDC187A0A096LP49 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
CCDC187A0A096LP49 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC15.31■□□□□ 0.04
CCDC187A0A096LP49 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC15.31■□□□□ 0.04
CCDC187A0A096LP49 MIR4259-201ENST00000584466 101 ntBASIC15.31■□□□□ 0.04
CCDC187A0A096LP49 AC010319.3-201ENST00000597028 470 ntBASIC15.31■□□□□ 0.04
CCDC187A0A096LP49 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
CCDC187A0A096LP49 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC15.31■□□□□ 0.04
CCDC187A0A096LP49 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCDC187A0A096LP49 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC15.31■□□□□ 0.04
CCDC187A0A096LP49 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCDC187A0A096LP49 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC15.31■□□□□ 0.04
CCDC187A0A096LP49 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC15.31■□□□□ 0.04
CCDC187A0A096LP49 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC15.31■□□□□ 0.04
CCDC187A0A096LP49 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
CCDC187A0A096LP49 CDC14C-201ENST00000428251 1719 ntBASIC15.31■□□□□ 0.04
CCDC187A0A096LP49 LINC01144-201ENST00000626198 1710 ntBASIC15.31■□□□□ 0.04
CCDC187A0A096LP49 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CCDC187A0A096LP49 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC15.31■□□□□ 0.04
CCDC187A0A096LP49 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC15.31■□□□□ 0.04
CCDC187A0A096LP49 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCDC187A0A096LP49 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC15.31■□□□□ 0.04
CCDC187A0A096LP49 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCDC187A0A096LP49 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms