Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC12.32□□□□□ -0.44
HLA-DRB4X5D2U9 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
HLA-DRB4X5D2U9 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
HLA-DRB4X5D2U9 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
HLA-DRB4X5D2U9 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
HLA-DRB4X5D2U9 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
HLA-DRB4X5D2U9 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
HLA-DRB4X5D2U9 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
HLA-DRB4X5D2U9 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
HLA-DRB4X5D2U9 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
HLA-DRB4X5D2U9 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
HLA-DRB4X5D2U9 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
HLA-DRB4X5D2U9 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
HLA-DRB4X5D2U9 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
HLA-DRB4X5D2U9 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC12.32□□□□□ -0.44
HLA-DRB4X5D2U9 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC12.32□□□□□ -0.44
HLA-DRB4X5D2U9 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC12.32□□□□□ -0.44
HLA-DRB4X5D2U9 KRT18P3-201ENST00000451602 1288 ntBASIC12.32□□□□□ -0.44
HLA-DRB4X5D2U9 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC12.32□□□□□ -0.44
HLA-DRB4X5D2U9 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC12.32□□□□□ -0.44
HLA-DRB4X5D2U9 NMU-203ENST00000507338 658 ntTSL 3 BASIC12.32□□□□□ -0.44
HLA-DRB4X5D2U9 SMN2-210ENST00000511812 867 ntTSL 2 BASIC12.32□□□□□ -0.44
HLA-DRB4X5D2U9 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC12.32□□□□□ -0.44
HLA-DRB4X5D2U9 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC12.32□□□□□ -0.44
HLA-DRB4X5D2U9 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC12.32□□□□□ -0.44
HLA-DRB4X5D2U9 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC12.32□□□□□ -0.44
HLA-DRB4X5D2U9 AC109635.5-201ENST00000533593 962 ntBASIC12.32□□□□□ -0.44
HLA-DRB4X5D2U9 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
HLA-DRB4X5D2U9 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
HLA-DRB4X5D2U9 AC018845.2-201ENST00000568326 409 ntBASIC12.32□□□□□ -0.44
HLA-DRB4X5D2U9 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
HLA-DRB4X5D2U9 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC12.32□□□□□ -0.44
HLA-DRB4X5D2U9 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC12.32□□□□□ -0.44
HLA-DRB4X5D2U9 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC12.32□□□□□ -0.44
HLA-DRB4X5D2U9 AC140113.2-201ENST00000604370 208 ntBASIC12.32□□□□□ -0.44
HLA-DRB4X5D2U9 AC004877.2-201ENST00000623941 599 ntBASIC12.32□□□□□ -0.44
HLA-DRB4X5D2U9 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
HLA-DRB4X5D2U9 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
HLA-DRB4X5D2U9 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
HLA-DRB4X5D2U9 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
HLA-DRB4X5D2U9 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
HLA-DRB4X5D2U9 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
HLA-DRB4X5D2U9 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
HLA-DRB4X5D2U9 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
HLA-DRB4X5D2U9 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC12.32□□□□□ -0.44
HLA-DRB4X5D2U9 ME2P1-201ENST00000426028 1970 ntBASIC12.32□□□□□ -0.44
HLA-DRB4X5D2U9 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
HLA-DRB4X5D2U9 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
HLA-DRB4X5D2U9 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
HLA-DRB4X5D2U9 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
HLA-DRB4X5D2U9 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC12.32□□□□□ -0.44
HLA-DRB4X5D2U9 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
HLA-DRB4X5D2U9 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
HLA-DRB4X5D2U9 PCGF3-213ENST00000620529 1899 ntBASIC12.31□□□□□ -0.44
HLA-DRB4X5D2U9 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC12.31□□□□□ -0.44
HLA-DRB4X5D2U9 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
HLA-DRB4X5D2U9 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC12.31□□□□□ -0.44
HLA-DRB4X5D2U9 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
HLA-DRB4X5D2U9 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC12.31□□□□□ -0.44
HLA-DRB4X5D2U9 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
HLA-DRB4X5D2U9 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC12.31□□□□□ -0.44
HLA-DRB4X5D2U9 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
HLA-DRB4X5D2U9 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC12.31□□□□□ -0.44
HLA-DRB4X5D2U9 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC12.31□□□□□ -0.44
HLA-DRB4X5D2U9 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
HLA-DRB4X5D2U9 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
HLA-DRB4X5D2U9 AC025580.3-201ENST00000617932 1424 ntBASIC12.31□□□□□ -0.44
HLA-DRB4X5D2U9 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
HLA-DRB4X5D2U9 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC12.31□□□□□ -0.44
HLA-DRB4X5D2U9 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
HLA-DRB4X5D2U9 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
HLA-DRB4X5D2U9 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
HLA-DRB4X5D2U9 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC12.31□□□□□ -0.44
HLA-DRB4X5D2U9 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
HLA-DRB4X5D2U9 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
HLA-DRB4X5D2U9 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC12.31□□□□□ -0.44
HLA-DRB4X5D2U9 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC12.31□□□□□ -0.44
HLA-DRB4X5D2U9 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC12.31□□□□□ -0.44
HLA-DRB4X5D2U9 DPM2-202ENST00000373110 738 ntTSL 2 BASIC12.31□□□□□ -0.44
HLA-DRB4X5D2U9 CD99-202ENST00000381180 530 ntTSL 2 BASIC12.31□□□□□ -0.44
HLA-DRB4X5D2U9 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
HLA-DRB4X5D2U9 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
HLA-DRB4X5D2U9 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC12.31□□□□□ -0.44
HLA-DRB4X5D2U9 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC12.31□□□□□ -0.44
HLA-DRB4X5D2U9 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC12.31□□□□□ -0.44
HLA-DRB4X5D2U9 KRT19P2-202ENST00000557173 1012 ntBASIC12.31□□□□□ -0.44
HLA-DRB4X5D2U9 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
HLA-DRB4X5D2U9 NME4-212ENST00000621774 904 ntTSL 3 BASIC12.31□□□□□ -0.44
HLA-DRB4X5D2U9 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC12.31□□□□□ -0.44
HLA-DRB4X5D2U9 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
HLA-DRB4X5D2U9 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
HLA-DRB4X5D2U9 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
HLA-DRB4X5D2U9 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
HLA-DRB4X5D2U9 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
HLA-DRB4X5D2U9 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
HLA-DRB4X5D2U9 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
HLA-DRB4X5D2U9 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
HLA-DRB4X5D2U9 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
HLA-DRB4X5D2U9 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
HLA-DRB4X5D2U9 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC12.31□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms