Protein–RNA interactions for Protein: Q9Y696

CLIC4, Chloride intracellular channel protein 4, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4Q9Y696 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
CLIC4Q9Y696 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CLIC4Q9Y696 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC18.56■□□□□ 0.56
CLIC4Q9Y696 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CLIC4Q9Y696 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CLIC4Q9Y696 AC144831.1-201ENST00000573312 2656 ntBASIC18.56■□□□□ 0.56
CLIC4Q9Y696 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CLIC4Q9Y696 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CLIC4Q9Y696 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
CLIC4Q9Y696 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLIC4Q9Y696 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CLIC4Q9Y696 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC18.55■□□□□ 0.56
CLIC4Q9Y696 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLIC4Q9Y696 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLIC4Q9Y696 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLIC4Q9Y696 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLIC4Q9Y696 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLIC4Q9Y696 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
CLIC4Q9Y696 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CLIC4Q9Y696 MED15P5-201ENST00000423150 992 ntBASIC18.55■□□□□ 0.56
CLIC4Q9Y696 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC18.55■□□□□ 0.56
CLIC4Q9Y696 KRT18P3-201ENST00000451602 1288 ntBASIC18.55■□□□□ 0.56
CLIC4Q9Y696 AL161645.1-201ENST00000622716 1255 ntBASIC18.55■□□□□ 0.56
CLIC4Q9Y696 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
CLIC4Q9Y696 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CLIC4Q9Y696 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC18.55■□□□□ 0.56
CLIC4Q9Y696 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLIC4Q9Y696 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLIC4Q9Y696 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
CLIC4Q9Y696 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC18.55■□□□□ 0.56
CLIC4Q9Y696 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC18.55■□□□□ 0.56
CLIC4Q9Y696 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
CLIC4Q9Y696 ACE-204ENST00000428043 5120 ntTSL 2 BASIC18.55■□□□□ 0.56
CLIC4Q9Y696 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC18.55■□□□□ 0.56
CLIC4Q9Y696 GOLGA2P9-201ENST00000596977 1937 ntBASIC18.55■□□□□ 0.56
CLIC4Q9Y696 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLIC4Q9Y696 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
CLIC4Q9Y696 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
CLIC4Q9Y696 FOXO1B-201ENST00000504678 1527 ntBASIC18.54■□□□□ 0.56
CLIC4Q9Y696 PMS2P7-201ENST00000506558 1336 ntBASIC18.54■□□□□ 0.56
CLIC4Q9Y696 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CLIC4Q9Y696 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CLIC4Q9Y696 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC18.54■□□□□ 0.56
CLIC4Q9Y696 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC18.54■□□□□ 0.56
CLIC4Q9Y696 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
CLIC4Q9Y696 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CLIC4Q9Y696 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
CLIC4Q9Y696 AL596257.1-201ENST00000641463 2694 ntBASIC18.54■□□□□ 0.56
CLIC4Q9Y696 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CLIC4Q9Y696 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
CLIC4Q9Y696 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CLIC4Q9Y696 GPX1P2-201ENST00000429271 606 ntBASIC18.54■□□□□ 0.56
CLIC4Q9Y696 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC18.54■□□□□ 0.56
CLIC4Q9Y696 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CLIC4Q9Y696 RNA5SP416-201ENST00000516838 111 ntBASIC18.54■□□□□ 0.56
CLIC4Q9Y696 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC18.54■□□□□ 0.56
CLIC4Q9Y696 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC18.54■□□□□ 0.56
CLIC4Q9Y696 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CLIC4Q9Y696 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC18.54■□□□□ 0.56
CLIC4Q9Y696 AC027601.4-201ENST00000611259 610 ntBASIC18.54■□□□□ 0.56
CLIC4Q9Y696 AC073347.1-201ENST00000421633 2643 ntBASIC18.54■□□□□ 0.56
CLIC4Q9Y696 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC18.54■□□□□ 0.56
CLIC4Q9Y696 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
CLIC4Q9Y696 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CLIC4Q9Y696 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC18.54■□□□□ 0.56
CLIC4Q9Y696 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CLIC4Q9Y696 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CLIC4Q9Y696 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CLIC4Q9Y696 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CLIC4Q9Y696 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CLIC4Q9Y696 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CLIC4Q9Y696 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CLIC4Q9Y696 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CLIC4Q9Y696 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CLIC4Q9Y696 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC18.53■□□□□ 0.56
CLIC4Q9Y696 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC18.53■□□□□ 0.56
CLIC4Q9Y696 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC18.53■□□□□ 0.56
CLIC4Q9Y696 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CLIC4Q9Y696 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CLIC4Q9Y696 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CLIC4Q9Y696 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CLIC4Q9Y696 AC002056.1-201ENST00000395613 760 ntBASIC18.53■□□□□ 0.56
CLIC4Q9Y696 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
CLIC4Q9Y696 HNRNPA1P28-201ENST00000424481 961 ntBASIC18.53■□□□□ 0.56
CLIC4Q9Y696 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC18.53■□□□□ 0.56
CLIC4Q9Y696 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC18.53■□□□□ 0.56
CLIC4Q9Y696 MIR4321-201ENST00000592276 80 ntBASIC18.53■□□□□ 0.56
CLIC4Q9Y696 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC18.53■□□□□ 0.56
CLIC4Q9Y696 AL365330.1-201ENST00000607459 531 ntBASIC18.53■□□□□ 0.56
CLIC4Q9Y696 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
CLIC4Q9Y696 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CLIC4Q9Y696 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CLIC4Q9Y696 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC18.53■□□□□ 0.56
CLIC4Q9Y696 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC18.53■□□□□ 0.56
CLIC4Q9Y696 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CLIC4Q9Y696 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CLIC4Q9Y696 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC18.53■□□□□ 0.56
CLIC4Q9Y696 AC013268.4-201ENST00000637413 2228 ntBASIC18.53■□□□□ 0.56
CLIC4Q9Y696 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC18.53■□□□□ 0.56
CLIC4Q9Y696 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms