Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
RHBDD3Q9Y3P4 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC14.32□□□□□ -0.12
RHBDD3Q9Y3P4 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
RHBDD3Q9Y3P4 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RHBDD3Q9Y3P4 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RHBDD3Q9Y3P4 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RHBDD3Q9Y3P4 AC126177.1-201ENST00000547829 2218 ntBASIC14.31□□□□□ -0.12
RHBDD3Q9Y3P4 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC14.31□□□□□ -0.12
RHBDD3Q9Y3P4 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
RHBDD3Q9Y3P4 REXO1L8P-201ENST00000604378 1897 ntBASIC14.31□□□□□ -0.12
RHBDD3Q9Y3P4 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
RHBDD3Q9Y3P4 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RHBDD3Q9Y3P4 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
RHBDD3Q9Y3P4 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RHBDD3Q9Y3P4 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
RHBDD3Q9Y3P4 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RHBDD3Q9Y3P4 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RHBDD3Q9Y3P4 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RHBDD3Q9Y3P4 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
RHBDD3Q9Y3P4 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC14.31□□□□□ -0.12
RHBDD3Q9Y3P4 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC14.31□□□□□ -0.12
RHBDD3Q9Y3P4 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RHBDD3Q9Y3P4 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RHBDD3Q9Y3P4 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC14.31□□□□□ -0.12
RHBDD3Q9Y3P4 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RHBDD3Q9Y3P4 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RHBDD3Q9Y3P4 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC14.31□□□□□ -0.12
RHBDD3Q9Y3P4 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
RHBDD3Q9Y3P4 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RHBDD3Q9Y3P4 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RHBDD3Q9Y3P4 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
RHBDD3Q9Y3P4 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RHBDD3Q9Y3P4 STARD13-205ENST00000439831 945 ntTSL 2 BASIC14.31□□□□□ -0.12
RHBDD3Q9Y3P4 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
RHBDD3Q9Y3P4 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC14.31□□□□□ -0.12
RHBDD3Q9Y3P4 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC14.31□□□□□ -0.12
RHBDD3Q9Y3P4 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
RHBDD3Q9Y3P4 PENK-208ENST00000523051 772 ntTSL 5 BASIC14.31□□□□□ -0.12
RHBDD3Q9Y3P4 POLD4-207ENST00000531239 584 ntTSL 2 BASIC14.31□□□□□ -0.12
RHBDD3Q9Y3P4 TCAP-202ENST00000578283 583 ntTSL 5 BASIC14.31□□□□□ -0.12
RHBDD3Q9Y3P4 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RHBDD3Q9Y3P4 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC14.31□□□□□ -0.12
RHBDD3Q9Y3P4 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC14.31□□□□□ -0.12
RHBDD3Q9Y3P4 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC14.31□□□□□ -0.12
RHBDD3Q9Y3P4 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC14.31□□□□□ -0.12
RHBDD3Q9Y3P4 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC14.31□□□□□ -0.12
RHBDD3Q9Y3P4 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
RHBDD3Q9Y3P4 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RHBDD3Q9Y3P4 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RHBDD3Q9Y3P4 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RHBDD3Q9Y3P4 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
RHBDD3Q9Y3P4 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC14.31□□□□□ -0.12
RHBDD3Q9Y3P4 AC112504.1-201ENST00000623415 1841 ntBASIC14.31□□□□□ -0.12
RHBDD3Q9Y3P4 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC14.31□□□□□ -0.12
RHBDD3Q9Y3P4 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RHBDD3Q9Y3P4 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RHBDD3Q9Y3P4 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RHBDD3Q9Y3P4 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RHBDD3Q9Y3P4 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC14.31□□□□□ -0.12
RHBDD3Q9Y3P4 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RHBDD3Q9Y3P4 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RHBDD3Q9Y3P4 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
RHBDD3Q9Y3P4 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC14.31□□□□□ -0.12
RHBDD3Q9Y3P4 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RHBDD3Q9Y3P4 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC14.31□□□□□ -0.12
RHBDD3Q9Y3P4 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC14.3□□□□□ -0.12
RHBDD3Q9Y3P4 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
RHBDD3Q9Y3P4 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RHBDD3Q9Y3P4 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
RHBDD3Q9Y3P4 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
RHBDD3Q9Y3P4 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
RHBDD3Q9Y3P4 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
RHBDD3Q9Y3P4 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC14.3□□□□□ -0.12
RHBDD3Q9Y3P4 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
RHBDD3Q9Y3P4 GPAA1P2-202ENST00000606848 1787 ntBASIC14.3□□□□□ -0.12
RHBDD3Q9Y3P4 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
RHBDD3Q9Y3P4 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC14.3□□□□□ -0.12
RHBDD3Q9Y3P4 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RHBDD3Q9Y3P4 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
RHBDD3Q9Y3P4 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RHBDD3Q9Y3P4 CRYGEP-201ENST00000412192 528 ntBASIC14.3□□□□□ -0.12
RHBDD3Q9Y3P4 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC14.3□□□□□ -0.12
RHBDD3Q9Y3P4 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC14.3□□□□□ -0.12
RHBDD3Q9Y3P4 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC14.3□□□□□ -0.12
RHBDD3Q9Y3P4 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC14.3□□□□□ -0.12
RHBDD3Q9Y3P4 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC14.3□□□□□ -0.12
RHBDD3Q9Y3P4 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC14.3□□□□□ -0.12
RHBDD3Q9Y3P4 MIR4515-201ENST00000584082 81 ntBASIC14.3□□□□□ -0.12
RHBDD3Q9Y3P4 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RHBDD3Q9Y3P4 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RHBDD3Q9Y3P4 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC14.3□□□□□ -0.12
RHBDD3Q9Y3P4 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RHBDD3Q9Y3P4 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RHBDD3Q9Y3P4 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RHBDD3Q9Y3P4 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RHBDD3Q9Y3P4 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RHBDD3Q9Y3P4 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
RHBDD3Q9Y3P4 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC14.3□□□□□ -0.12
RHBDD3Q9Y3P4 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RHBDD3Q9Y3P4 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms