Protein–RNA interactions for Protein: Q9Y2I6

NINL, Ninein-like protein, humanhuman

Predictions only

Length 1,382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NINLQ9Y2I6 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
NINLQ9Y2I6 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC22.04■■□□□ 1.12
NINLQ9Y2I6 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
NINLQ9Y2I6 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
NINLQ9Y2I6 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
NINLQ9Y2I6 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC22.04■■□□□ 1.12
NINLQ9Y2I6 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
NINLQ9Y2I6 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
NINLQ9Y2I6 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
NINLQ9Y2I6 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
NINLQ9Y2I6 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
NINLQ9Y2I6 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC22.03■■□□□ 1.12
NINLQ9Y2I6 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
NINLQ9Y2I6 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC22.03■■□□□ 1.12
NINLQ9Y2I6 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC22.03■■□□□ 1.12
NINLQ9Y2I6 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC22.03■■□□□ 1.12
NINLQ9Y2I6 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC22.03■■□□□ 1.12
NINLQ9Y2I6 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC22.03■■□□□ 1.12
NINLQ9Y2I6 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC22.03■■□□□ 1.12
NINLQ9Y2I6 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC22.03■■□□□ 1.12
NINLQ9Y2I6 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC22.03■■□□□ 1.12
NINLQ9Y2I6 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
NINLQ9Y2I6 ELP6-209ENST00000446787 894 ntTSL 3 BASIC22.03■■□□□ 1.12
NINLQ9Y2I6 AL589987.1-201ENST00000453380 819 ntBASIC22.03■■□□□ 1.12
NINLQ9Y2I6 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
NINLQ9Y2I6 AC023310.3-201ENST00000557027 670 ntBASIC22.03■■□□□ 1.12
NINLQ9Y2I6 AC100756.1-201ENST00000562736 682 ntBASIC22.03■■□□□ 1.12
NINLQ9Y2I6 AC138749.3-201ENST00000567691 622 ntBASIC22.03■■□□□ 1.12
NINLQ9Y2I6 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
NINLQ9Y2I6 AC116165.1-201ENST00000611806 668 ntBASIC22.03■■□□□ 1.12
NINLQ9Y2I6 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC22.03■■□□□ 1.12
NINLQ9Y2I6 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC22.03■■□□□ 1.12
NINLQ9Y2I6 AC005052.1-201ENST00000625181 2492 ntBASIC22.03■■□□□ 1.12
NINLQ9Y2I6 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
NINLQ9Y2I6 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC22.03■■□□□ 1.12
NINLQ9Y2I6 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
NINLQ9Y2I6 AC006449.6-201ENST00000612330 2296 ntBASIC22.03■■□□□ 1.12
NINLQ9Y2I6 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC22.03■■□□□ 1.12
NINLQ9Y2I6 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC22.03■■□□□ 1.12
NINLQ9Y2I6 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
NINLQ9Y2I6 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC22.03■■□□□ 1.12
NINLQ9Y2I6 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
NINLQ9Y2I6 AC124067.4-201ENST00000519691 2379 ntBASIC22.03■■□□□ 1.12
NINLQ9Y2I6 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
NINLQ9Y2I6 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
NINLQ9Y2I6 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
NINLQ9Y2I6 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC22.03■■□□□ 1.12
NINLQ9Y2I6 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
NINLQ9Y2I6 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC22.03■■□□□ 1.12
NINLQ9Y2I6 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC22.02■■□□□ 1.12
NINLQ9Y2I6 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
NINLQ9Y2I6 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
NINLQ9Y2I6 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC22.02■■□□□ 1.12
NINLQ9Y2I6 AC098614.1-201ENST00000368528 745 ntBASIC22.02■■□□□ 1.12
NINLQ9Y2I6 MIR648-201ENST00000385046 94 ntBASIC22.02■■□□□ 1.12
NINLQ9Y2I6 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC22.02■■□□□ 1.12
NINLQ9Y2I6 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC22.02■■□□□ 1.12
NINLQ9Y2I6 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC22.02■■□□□ 1.12
NINLQ9Y2I6 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC22.02■■□□□ 1.12
NINLQ9Y2I6 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC22.02■■□□□ 1.12
NINLQ9Y2I6 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC22.02■■□□□ 1.12
NINLQ9Y2I6 Six3os1_5.1-201ENST00000611000 271 ntBASIC22.02■■□□□ 1.12
NINLQ9Y2I6 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
NINLQ9Y2I6 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC22.02■■□□□ 1.12
NINLQ9Y2I6 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC22.02■■□□□ 1.12
NINLQ9Y2I6 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC22.02■■□□□ 1.12
NINLQ9Y2I6 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
NINLQ9Y2I6 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC22.02■■□□□ 1.12
NINLQ9Y2I6 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
NINLQ9Y2I6 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC22.02■■□□□ 1.12
NINLQ9Y2I6 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
NINLQ9Y2I6 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
NINLQ9Y2I6 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC22.02■■□□□ 1.12
NINLQ9Y2I6 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC22.02■■□□□ 1.12
NINLQ9Y2I6 AC092171.3-201ENST00000610122 2651 ntBASIC22.02■■□□□ 1.12
NINLQ9Y2I6 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
NINLQ9Y2I6 MTHFR-217ENST00000641820 1569 ntBASIC22.02■■□□□ 1.12
NINLQ9Y2I6 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
NINLQ9Y2I6 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
NINLQ9Y2I6 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC22.02■■□□□ 1.11
NINLQ9Y2I6 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
NINLQ9Y2I6 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
NINLQ9Y2I6 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC22.01■■□□□ 1.11
NINLQ9Y2I6 OSM-203ENST00000403463 464 ntTSL 3 BASIC22.01■■□□□ 1.11
NINLQ9Y2I6 AC136604.1-201ENST00000418535 575 ntBASIC22.01■■□□□ 1.11
NINLQ9Y2I6 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC22.01■■□□□ 1.11
NINLQ9Y2I6 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC22.01■■□□□ 1.11
NINLQ9Y2I6 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC22.01■■□□□ 1.11
NINLQ9Y2I6 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC22.01■■□□□ 1.11
NINLQ9Y2I6 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC22.01■■□□□ 1.11
NINLQ9Y2I6 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC22.01■■□□□ 1.11
NINLQ9Y2I6 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC22.01■■□□□ 1.11
NINLQ9Y2I6 AC007431.3-201ENST00000623221 587 ntBASIC22.01■■□□□ 1.11
NINLQ9Y2I6 HTR7P1-202ENST00000624664 4411 ntBASIC22.01■■□□□ 1.11
NINLQ9Y2I6 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
NINLQ9Y2I6 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC22.01■■□□□ 1.11
NINLQ9Y2I6 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
NINLQ9Y2I6 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC22.01■■□□□ 1.11
NINLQ9Y2I6 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
NINLQ9Y2I6 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms