Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC21.63■■□□□ 1.05
NPC1L1Q9UHC9 TMPRSS11CP-201ENST00000453277 683 ntBASIC21.63■■□□□ 1.05
NPC1L1Q9UHC9 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC21.63■■□□□ 1.05
NPC1L1Q9UHC9 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC21.63■■□□□ 1.05
NPC1L1Q9UHC9 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
NPC1L1Q9UHC9 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
NPC1L1Q9UHC9 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
NPC1L1Q9UHC9 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC21.63■■□□□ 1.05
NPC1L1Q9UHC9 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
NPC1L1Q9UHC9 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC21.63■■□□□ 1.05
NPC1L1Q9UHC9 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
NPC1L1Q9UHC9 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC21.63■■□□□ 1.05
NPC1L1Q9UHC9 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
NPC1L1Q9UHC9 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
NPC1L1Q9UHC9 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC21.63■■□□□ 1.05
NPC1L1Q9UHC9 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
NPC1L1Q9UHC9 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC21.62■■□□□ 1.05
NPC1L1Q9UHC9 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
NPC1L1Q9UHC9 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
NPC1L1Q9UHC9 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC21.62■■□□□ 1.05
NPC1L1Q9UHC9 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC21.62■■□□□ 1.05
NPC1L1Q9UHC9 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
NPC1L1Q9UHC9 FAM207CP-201ENST00000443486 507 ntBASIC21.62■■□□□ 1.05
NPC1L1Q9UHC9 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC21.62■■□□□ 1.05
NPC1L1Q9UHC9 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC21.62■■□□□ 1.05
NPC1L1Q9UHC9 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC21.62■■□□□ 1.05
NPC1L1Q9UHC9 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC21.62■■□□□ 1.05
NPC1L1Q9UHC9 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC21.62■■□□□ 1.05
NPC1L1Q9UHC9 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC21.62■■□□□ 1.05
NPC1L1Q9UHC9 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC21.62■■□□□ 1.05
NPC1L1Q9UHC9 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC21.62■■□□□ 1.05
NPC1L1Q9UHC9 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC21.62■■□□□ 1.05
NPC1L1Q9UHC9 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
NPC1L1Q9UHC9 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
NPC1L1Q9UHC9 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC21.62■■□□□ 1.05
NPC1L1Q9UHC9 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
NPC1L1Q9UHC9 AC018892.3-201ENST00000623986 2499 ntBASIC21.62■■□□□ 1.05
NPC1L1Q9UHC9 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
NPC1L1Q9UHC9 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
NPC1L1Q9UHC9 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
NPC1L1Q9UHC9 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC21.62■■□□□ 1.05
NPC1L1Q9UHC9 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC21.62■■□□□ 1.05
NPC1L1Q9UHC9 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
NPC1L1Q9UHC9 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC21.61■■□□□ 1.05
NPC1L1Q9UHC9 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC21.61■■□□□ 1.05
NPC1L1Q9UHC9 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC21.61■■□□□ 1.05
NPC1L1Q9UHC9 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC21.61■■□□□ 1.05
NPC1L1Q9UHC9 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
NPC1L1Q9UHC9 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
NPC1L1Q9UHC9 AC011467.4-201ENST00000594891 528 ntBASIC21.61■■□□□ 1.05
NPC1L1Q9UHC9 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC21.61■■□□□ 1.05
NPC1L1Q9UHC9 AL109936.8-201ENST00000641772 604 ntBASIC21.61■■□□□ 1.05
NPC1L1Q9UHC9 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC21.61■■□□□ 1.05
NPC1L1Q9UHC9 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC21.61■■□□□ 1.05
NPC1L1Q9UHC9 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC21.61■■□□□ 1.05
NPC1L1Q9UHC9 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC21.61■■□□□ 1.05
NPC1L1Q9UHC9 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC21.61■■□□□ 1.05
NPC1L1Q9UHC9 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC21.61■■□□□ 1.05
NPC1L1Q9UHC9 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
NPC1L1Q9UHC9 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
NPC1L1Q9UHC9 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
NPC1L1Q9UHC9 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
NPC1L1Q9UHC9 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
NPC1L1Q9UHC9 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
NPC1L1Q9UHC9 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC21.61■■□□□ 1.05
NPC1L1Q9UHC9 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC21.61■■□□□ 1.05
NPC1L1Q9UHC9 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
NPC1L1Q9UHC9 RAC2-204ENST00000406508 893 ntTSL 5 BASIC21.61■■□□□ 1.05
NPC1L1Q9UHC9 RASL12-203ENST00000434605 982 ntTSL 2 BASIC21.61■■□□□ 1.05
NPC1L1Q9UHC9 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC21.61■■□□□ 1.05
NPC1L1Q9UHC9 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC21.61■■□□□ 1.05
NPC1L1Q9UHC9 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC21.61■■□□□ 1.05
NPC1L1Q9UHC9 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC21.61■■□□□ 1.05
NPC1L1Q9UHC9 REEP4-207ENST00000523293 913 ntTSL 3 BASIC21.61■■□□□ 1.05
NPC1L1Q9UHC9 RAB35-202ENST00000534951 939 ntTSL 2 BASIC21.61■■□□□ 1.05
NPC1L1Q9UHC9 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
NPC1L1Q9UHC9 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
NPC1L1Q9UHC9 AC010491.1-201ENST00000563101 2797 ntBASIC21.6■■□□□ 1.05
NPC1L1Q9UHC9 AL607033.1-201ENST00000623900 1599 ntBASIC21.6■■□□□ 1.05
NPC1L1Q9UHC9 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
NPC1L1Q9UHC9 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
NPC1L1Q9UHC9 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC21.6■■□□□ 1.05
NPC1L1Q9UHC9 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
NPC1L1Q9UHC9 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
NPC1L1Q9UHC9 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
NPC1L1Q9UHC9 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC21.6■■□□□ 1.05
NPC1L1Q9UHC9 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC21.6■■□□□ 1.05
NPC1L1Q9UHC9 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
NPC1L1Q9UHC9 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC21.6■■□□□ 1.05
NPC1L1Q9UHC9 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC21.6■■□□□ 1.05
NPC1L1Q9UHC9 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC21.6■■□□□ 1.05
NPC1L1Q9UHC9 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC21.6■■□□□ 1.05
NPC1L1Q9UHC9 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC21.6■■□□□ 1.05
NPC1L1Q9UHC9 RHOA-206ENST00000454011 889 ntTSL 2 BASIC21.6■■□□□ 1.05
NPC1L1Q9UHC9 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC21.6■■□□□ 1.05
NPC1L1Q9UHC9 SPDYE18-201ENST00000510091 1050 ntBASIC21.6■■□□□ 1.05
NPC1L1Q9UHC9 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
NPC1L1Q9UHC9 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC21.6■■□□□ 1.05
NPC1L1Q9UHC9 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
NPC1L1Q9UHC9 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms