Protein–RNA interactions for Protein: Q9UBX2

DUX4, Double homeobox protein 4, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX4Q9UBX2 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC14.41□□□□□ -0.1
DUX4Q9UBX2 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
DUX4Q9UBX2 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
DUX4Q9UBX2 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
DUX4Q9UBX2 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
DUX4Q9UBX2 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
DUX4Q9UBX2 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
DUX4Q9UBX2 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
DUX4Q9UBX2 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC14.41□□□□□ -0.1
DUX4Q9UBX2 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
DUX4Q9UBX2 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
DUX4Q9UBX2 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC14.41□□□□□ -0.1
DUX4Q9UBX2 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
DUX4Q9UBX2 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
DUX4Q9UBX2 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC14.41□□□□□ -0.1
DUX4Q9UBX2 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC14.41□□□□□ -0.1
DUX4Q9UBX2 PRYP5-201ENST00000451909 266 ntBASIC14.41□□□□□ -0.1
DUX4Q9UBX2 RNA5SP419-201ENST00000515908 135 ntBASIC14.41□□□□□ -0.1
DUX4Q9UBX2 MSRA-206ENST00000521209 814 ntTSL 3 BASIC14.41□□□□□ -0.1
DUX4Q9UBX2 OR7E14P-202ENST00000530490 1290 ntBASIC14.41□□□□□ -0.1
DUX4Q9UBX2 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC14.41□□□□□ -0.1
DUX4Q9UBX2 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC14.41□□□□□ -0.1
DUX4Q9UBX2 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC14.41□□□□□ -0.1
DUX4Q9UBX2 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC14.41□□□□□ -0.1
DUX4Q9UBX2 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC14.41□□□□□ -0.1
DUX4Q9UBX2 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
DUX4Q9UBX2 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
DUX4Q9UBX2 AC116353.5-201ENST00000638148 1699 ntBASIC14.41□□□□□ -0.1
DUX4Q9UBX2 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC14.41□□□□□ -0.1
DUX4Q9UBX2 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC14.41□□□□□ -0.1
DUX4Q9UBX2 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
DUX4Q9UBX2 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
DUX4Q9UBX2 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
DUX4Q9UBX2 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
DUX4Q9UBX2 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
DUX4Q9UBX2 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC14.41□□□□□ -0.1
DUX4Q9UBX2 AFF1-201ENST00000307808 9390 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
DUX4Q9UBX2 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
DUX4Q9UBX2 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
DUX4Q9UBX2 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
DUX4Q9UBX2 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
DUX4Q9UBX2 AC093525.9-201ENST00000624961 1746 ntBASIC14.41□□□□□ -0.1
DUX4Q9UBX2 AMT-233ENST00000636522 1620 ntTSL 2 BASIC14.41□□□□□ -0.1
DUX4Q9UBX2 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
DUX4Q9UBX2 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
DUX4Q9UBX2 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
DUX4Q9UBX2 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC14.4□□□□□ -0.1
DUX4Q9UBX2 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
DUX4Q9UBX2 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
DUX4Q9UBX2 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
DUX4Q9UBX2 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
DUX4Q9UBX2 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC14.4□□□□□ -0.1
DUX4Q9UBX2 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC14.4□□□□□ -0.1
DUX4Q9UBX2 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
DUX4Q9UBX2 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
DUX4Q9UBX2 SUSD6-201ENST00000342745 5388 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
DUX4Q9UBX2 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
DUX4Q9UBX2 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
DUX4Q9UBX2 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC14.4□□□□□ -0.1
DUX4Q9UBX2 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
DUX4Q9UBX2 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
DUX4Q9UBX2 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
DUX4Q9UBX2 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
DUX4Q9UBX2 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
DUX4Q9UBX2 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC14.4□□□□□ -0.1
DUX4Q9UBX2 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
DUX4Q9UBX2 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
DUX4Q9UBX2 CENPM-204ENST00000402420 688 ntTSL 5 BASIC14.4□□□□□ -0.1
DUX4Q9UBX2 ELK2BP-201ENST00000415014 1224 ntBASIC14.4□□□□□ -0.1
DUX4Q9UBX2 AL031284.1-201ENST00000419297 478 ntBASIC14.4□□□□□ -0.1
DUX4Q9UBX2 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
DUX4Q9UBX2 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC14.4□□□□□ -0.1
DUX4Q9UBX2 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC14.4□□□□□ -0.1
DUX4Q9UBX2 FDX1P1-201ENST00000449115 551 ntBASIC14.4□□□□□ -0.1
DUX4Q9UBX2 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC14.4□□□□□ -0.1
DUX4Q9UBX2 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC14.4□□□□□ -0.1
DUX4Q9UBX2 AL773604.1-201ENST00000617417 272 ntBASIC14.4□□□□□ -0.1
DUX4Q9UBX2 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC14.4□□□□□ -0.1
DUX4Q9UBX2 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC14.4□□□□□ -0.1
DUX4Q9UBX2 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC14.4□□□□□ -0.1
DUX4Q9UBX2 FAM215A-202ENST00000632077 792 ntBASIC14.4□□□□□ -0.1
DUX4Q9UBX2 AC107918.4-202ENST00000641623 219 ntBASIC14.4□□□□□ -0.1
DUX4Q9UBX2 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
DUX4Q9UBX2 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
DUX4Q9UBX2 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
DUX4Q9UBX2 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
DUX4Q9UBX2 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
DUX4Q9UBX2 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
DUX4Q9UBX2 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
DUX4Q9UBX2 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC14.4□□□□□ -0.1
DUX4Q9UBX2 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC14.4□□□□□ -0.1
DUX4Q9UBX2 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
DUX4Q9UBX2 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
DUX4Q9UBX2 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
DUX4Q9UBX2 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
DUX4Q9UBX2 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC14.4□□□□□ -0.1
DUX4Q9UBX2 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC14.4□□□□□ -0.1
DUX4Q9UBX2 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
DUX4Q9UBX2 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
DUX4Q9UBX2 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms