Protein–RNA interactions for Protein: Q9NVF7

FBXO28, F-box only protein 28, humanhuman

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO28Q9NVF7 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
FBXO28Q9NVF7 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
FBXO28Q9NVF7 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
FBXO28Q9NVF7 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
FBXO28Q9NVF7 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
FBXO28Q9NVF7 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC18.58■□□□□ 0.56
FBXO28Q9NVF7 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC18.58■□□□□ 0.56
FBXO28Q9NVF7 FXR1-221ENST00000491674 365 ntTSL 2 BASIC18.58■□□□□ 0.56
FBXO28Q9NVF7 AC123567.1-201ENST00000548294 1261 ntBASIC18.58■□□□□ 0.56
FBXO28Q9NVF7 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC18.58■□□□□ 0.56
FBXO28Q9NVF7 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC18.58■□□□□ 0.56
FBXO28Q9NVF7 LINC01115-203ENST00000606068 577 ntBASIC18.58■□□□□ 0.56
FBXO28Q9NVF7 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC18.58■□□□□ 0.56
FBXO28Q9NVF7 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
FBXO28Q9NVF7 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC18.58■□□□□ 0.56
FBXO28Q9NVF7 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
FBXO28Q9NVF7 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
FBXO28Q9NVF7 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
FBXO28Q9NVF7 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
FBXO28Q9NVF7 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
FBXO28Q9NVF7 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC18.57■□□□□ 0.56
FBXO28Q9NVF7 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
FBXO28Q9NVF7 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
FBXO28Q9NVF7 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC18.57■□□□□ 0.56
FBXO28Q9NVF7 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC18.57■□□□□ 0.56
FBXO28Q9NVF7 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC18.57■□□□□ 0.56
FBXO28Q9NVF7 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
FBXO28Q9NVF7 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC18.57■□□□□ 0.56
FBXO28Q9NVF7 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC18.57■□□□□ 0.56
FBXO28Q9NVF7 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC18.57■□□□□ 0.56
FBXO28Q9NVF7 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC18.57■□□□□ 0.56
FBXO28Q9NVF7 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
FBXO28Q9NVF7 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
FBXO28Q9NVF7 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
FBXO28Q9NVF7 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
FBXO28Q9NVF7 AL512384.1-201ENST00000406683 331 ntBASIC18.57■□□□□ 0.56
FBXO28Q9NVF7 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC18.57■□□□□ 0.56
FBXO28Q9NVF7 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
FBXO28Q9NVF7 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC18.57■□□□□ 0.56
FBXO28Q9NVF7 SPIB-207ENST00000597855 564 ntTSL 4 BASIC18.57■□□□□ 0.56
FBXO28Q9NVF7 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC18.57■□□□□ 0.56
FBXO28Q9NVF7 MIR8072-201ENST00000614241 80 ntBASIC18.57■□□□□ 0.56
FBXO28Q9NVF7 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
FBXO28Q9NVF7 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
FBXO28Q9NVF7 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC18.57■□□□□ 0.56
FBXO28Q9NVF7 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC18.57■□□□□ 0.56
FBXO28Q9NVF7 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC18.57■□□□□ 0.56
FBXO28Q9NVF7 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
FBXO28Q9NVF7 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
FBXO28Q9NVF7 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
FBXO28Q9NVF7 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
FBXO28Q9NVF7 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
FBXO28Q9NVF7 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
FBXO28Q9NVF7 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
FBXO28Q9NVF7 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
FBXO28Q9NVF7 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
FBXO28Q9NVF7 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC18.56■□□□□ 0.56
FBXO28Q9NVF7 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC18.56■□□□□ 0.56
FBXO28Q9NVF7 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
FBXO28Q9NVF7 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
FBXO28Q9NVF7 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
FBXO28Q9NVF7 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
FBXO28Q9NVF7 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
FBXO28Q9NVF7 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
FBXO28Q9NVF7 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
FBXO28Q9NVF7 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
FBXO28Q9NVF7 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC18.56■□□□□ 0.56
FBXO28Q9NVF7 AC007274.1-201ENST00000439805 662 ntBASIC18.56■□□□□ 0.56
FBXO28Q9NVF7 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
FBXO28Q9NVF7 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
FBXO28Q9NVF7 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC18.56■□□□□ 0.56
FBXO28Q9NVF7 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC18.56■□□□□ 0.56
FBXO28Q9NVF7 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
FBXO28Q9NVF7 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
FBXO28Q9NVF7 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC18.56■□□□□ 0.56
FBXO28Q9NVF7 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC18.56■□□□□ 0.56
FBXO28Q9NVF7 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC18.56■□□□□ 0.56
FBXO28Q9NVF7 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
FBXO28Q9NVF7 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
FBXO28Q9NVF7 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
FBXO28Q9NVF7 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
FBXO28Q9NVF7 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
FBXO28Q9NVF7 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
FBXO28Q9NVF7 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
FBXO28Q9NVF7 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC18.56■□□□□ 0.56
FBXO28Q9NVF7 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
FBXO28Q9NVF7 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
FBXO28Q9NVF7 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
FBXO28Q9NVF7 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC18.55■□□□□ 0.56
FBXO28Q9NVF7 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
FBXO28Q9NVF7 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
FBXO28Q9NVF7 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
FBXO28Q9NVF7 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC18.55■□□□□ 0.56
FBXO28Q9NVF7 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
FBXO28Q9NVF7 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC18.55■□□□□ 0.56
FBXO28Q9NVF7 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
FBXO28Q9NVF7 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
FBXO28Q9NVF7 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC18.55■□□□□ 0.56
FBXO28Q9NVF7 AC004987.2-201ENST00000395959 1148 ntBASIC18.55■□□□□ 0.56
FBXO28Q9NVF7 ARSEP1-201ENST00000420443 635 ntBASIC18.55■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms