Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC18.03■□□□□ 0.48
BLOC1S4Q9NUP1 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
BLOC1S4Q9NUP1 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
BLOC1S4Q9NUP1 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
BLOC1S4Q9NUP1 FUK-207ENST00000571514 3054 ntTSL 2 BASIC18.03■□□□□ 0.48
BLOC1S4Q9NUP1 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
BLOC1S4Q9NUP1 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC18.03■□□□□ 0.48
BLOC1S4Q9NUP1 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
BLOC1S4Q9NUP1 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
BLOC1S4Q9NUP1 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
BLOC1S4Q9NUP1 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
BLOC1S4Q9NUP1 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC18.03■□□□□ 0.48
BLOC1S4Q9NUP1 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
BLOC1S4Q9NUP1 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
BLOC1S4Q9NUP1 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
BLOC1S4Q9NUP1 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
BLOC1S4Q9NUP1 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC18.02■□□□□ 0.48
BLOC1S4Q9NUP1 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
BLOC1S4Q9NUP1 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
BLOC1S4Q9NUP1 AP001282.1-201ENST00000531301 1499 ntBASIC18.02■□□□□ 0.48
BLOC1S4Q9NUP1 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
BLOC1S4Q9NUP1 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
BLOC1S4Q9NUP1 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
BLOC1S4Q9NUP1 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
BLOC1S4Q9NUP1 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
BLOC1S4Q9NUP1 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
BLOC1S4Q9NUP1 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
BLOC1S4Q9NUP1 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
BLOC1S4Q9NUP1 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
BLOC1S4Q9NUP1 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC18.02■□□□□ 0.48
BLOC1S4Q9NUP1 MIR1233-2-201ENST00000408138 82 ntBASIC18.02■□□□□ 0.48
BLOC1S4Q9NUP1 MIR1233-1-201ENST00000408722 82 ntBASIC18.02■□□□□ 0.48
BLOC1S4Q9NUP1 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC18.02■□□□□ 0.48
BLOC1S4Q9NUP1 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
BLOC1S4Q9NUP1 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC18.02■□□□□ 0.48
BLOC1S4Q9NUP1 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC18.02■□□□□ 0.48
BLOC1S4Q9NUP1 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
BLOC1S4Q9NUP1 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
BLOC1S4Q9NUP1 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC18.02■□□□□ 0.48
BLOC1S4Q9NUP1 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC18.02■□□□□ 0.48
BLOC1S4Q9NUP1 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC18.02■□□□□ 0.48
BLOC1S4Q9NUP1 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC18.02■□□□□ 0.48
BLOC1S4Q9NUP1 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
BLOC1S4Q9NUP1 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC18.02■□□□□ 0.47
BLOC1S4Q9NUP1 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
BLOC1S4Q9NUP1 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
BLOC1S4Q9NUP1 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC18.02■□□□□ 0.47
BLOC1S4Q9NUP1 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
BLOC1S4Q9NUP1 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
BLOC1S4Q9NUP1 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC18.02■□□□□ 0.47
BLOC1S4Q9NUP1 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
BLOC1S4Q9NUP1 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
BLOC1S4Q9NUP1 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC18.02■□□□□ 0.47
BLOC1S4Q9NUP1 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
BLOC1S4Q9NUP1 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC18.02■□□□□ 0.47
BLOC1S4Q9NUP1 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC18.01■□□□□ 0.47
BLOC1S4Q9NUP1 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
BLOC1S4Q9NUP1 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC18.01■□□□□ 0.47
BLOC1S4Q9NUP1 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC18.01■□□□□ 0.47
BLOC1S4Q9NUP1 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
BLOC1S4Q9NUP1 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
BLOC1S4Q9NUP1 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
BLOC1S4Q9NUP1 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC18.01■□□□□ 0.47
BLOC1S4Q9NUP1 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
BLOC1S4Q9NUP1 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC18.01■□□□□ 0.47
BLOC1S4Q9NUP1 BNIP3P1-202ENST00000550043 1585 ntBASIC18.01■□□□□ 0.47
BLOC1S4Q9NUP1 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
BLOC1S4Q9NUP1 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
BLOC1S4Q9NUP1 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
BLOC1S4Q9NUP1 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
BLOC1S4Q9NUP1 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
BLOC1S4Q9NUP1 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC18.01■□□□□ 0.47
BLOC1S4Q9NUP1 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
BLOC1S4Q9NUP1 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
BLOC1S4Q9NUP1 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
BLOC1S4Q9NUP1 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC18.01■□□□□ 0.47
BLOC1S4Q9NUP1 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
BLOC1S4Q9NUP1 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC18.01■□□□□ 0.47
BLOC1S4Q9NUP1 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
BLOC1S4Q9NUP1 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC18.01■□□□□ 0.47
BLOC1S4Q9NUP1 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
BLOC1S4Q9NUP1 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC18.01■□□□□ 0.47
BLOC1S4Q9NUP1 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC18.01■□□□□ 0.47
BLOC1S4Q9NUP1 MAX-210ENST00000555419 765 ntTSL 5 BASIC18.01■□□□□ 0.47
BLOC1S4Q9NUP1 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC18.01■□□□□ 0.47
BLOC1S4Q9NUP1 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
BLOC1S4Q9NUP1 AC011477.6-201ENST00000604980 1927 ntBASIC18.01■□□□□ 0.47
BLOC1S4Q9NUP1 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
BLOC1S4Q9NUP1 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC18.01■□□□□ 0.47
BLOC1S4Q9NUP1 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
BLOC1S4Q9NUP1 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
BLOC1S4Q9NUP1 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC18.01■□□□□ 0.47
BLOC1S4Q9NUP1 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC18.01■□□□□ 0.47
BLOC1S4Q9NUP1 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
BLOC1S4Q9NUP1 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
BLOC1S4Q9NUP1 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
BLOC1S4Q9NUP1 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC18.01■□□□□ 0.47
BLOC1S4Q9NUP1 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC18.01■□□□□ 0.47
BLOC1S4Q9NUP1 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
BLOC1S4Q9NUP1 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC18■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms