Protein–RNA interactions for Protein: Q9NTX5

ECHDC1, Ethylmalonyl-CoA decarboxylase, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1Q9NTX5 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
ECHDC1Q9NTX5 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC19.76■□□□□ 0.75
ECHDC1Q9NTX5 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ECHDC1Q9NTX5 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ECHDC1Q9NTX5 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ECHDC1Q9NTX5 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ECHDC1Q9NTX5 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ECHDC1Q9NTX5 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
ECHDC1Q9NTX5 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
ECHDC1Q9NTX5 BANF1P1-201ENST00000553684 263 ntBASIC19.76■□□□□ 0.75
ECHDC1Q9NTX5 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC19.76■□□□□ 0.75
ECHDC1Q9NTX5 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC19.76■□□□□ 0.75
ECHDC1Q9NTX5 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
ECHDC1Q9NTX5 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
ECHDC1Q9NTX5 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ECHDC1Q9NTX5 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC19.76■□□□□ 0.75
ECHDC1Q9NTX5 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
ECHDC1Q9NTX5 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC19.76■□□□□ 0.75
ECHDC1Q9NTX5 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC19.76■□□□□ 0.75
ECHDC1Q9NTX5 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ECHDC1Q9NTX5 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
ECHDC1Q9NTX5 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ECHDC1Q9NTX5 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC19.76■□□□□ 0.75
ECHDC1Q9NTX5 AL691432.1-201ENST00000596308 1422 ntBASIC19.76■□□□□ 0.75
ECHDC1Q9NTX5 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ECHDC1Q9NTX5 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
ECHDC1Q9NTX5 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ECHDC1Q9NTX5 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ECHDC1Q9NTX5 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC19.75■□□□□ 0.75
ECHDC1Q9NTX5 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
ECHDC1Q9NTX5 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC19.75■□□□□ 0.75
ECHDC1Q9NTX5 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ECHDC1Q9NTX5 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ECHDC1Q9NTX5 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC19.75■□□□□ 0.75
ECHDC1Q9NTX5 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
ECHDC1Q9NTX5 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
ECHDC1Q9NTX5 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC19.75■□□□□ 0.75
ECHDC1Q9NTX5 SPDYE7P-202ENST00000420373 878 ntBASIC19.75■□□□□ 0.75
ECHDC1Q9NTX5 AL353705.2-201ENST00000428243 662 ntBASIC19.75■□□□□ 0.75
ECHDC1Q9NTX5 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC19.75■□□□□ 0.75
ECHDC1Q9NTX5 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC19.75■□□□□ 0.75
ECHDC1Q9NTX5 CCDC74BP1-201ENST00000508880 1123 ntBASIC19.75■□□□□ 0.75
ECHDC1Q9NTX5 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC19.75■□□□□ 0.75
ECHDC1Q9NTX5 AC069262.1-201ENST00000539058 672 ntBASIC19.75■□□□□ 0.75
ECHDC1Q9NTX5 NAA38-207ENST00000576861 556 ntTSL 3 BASIC19.75■□□□□ 0.75
ECHDC1Q9NTX5 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC19.75■□□□□ 0.75
ECHDC1Q9NTX5 AC003101.2-201ENST00000612557 442 ntBASIC19.75■□□□□ 0.75
ECHDC1Q9NTX5 MIR6080-201ENST00000617359 66 ntBASIC19.75■□□□□ 0.75
ECHDC1Q9NTX5 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC19.75■□□□□ 0.75
ECHDC1Q9NTX5 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
ECHDC1Q9NTX5 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC19.75■□□□□ 0.75
ECHDC1Q9NTX5 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ECHDC1Q9NTX5 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ECHDC1Q9NTX5 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ECHDC1Q9NTX5 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ECHDC1Q9NTX5 SUPT20HL2-201ENST00000486479 2409 ntBASIC19.75■□□□□ 0.75
ECHDC1Q9NTX5 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
ECHDC1Q9NTX5 AC010491.1-201ENST00000563101 2797 ntBASIC19.75■□□□□ 0.75
ECHDC1Q9NTX5 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC19.75■□□□□ 0.75
ECHDC1Q9NTX5 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ECHDC1Q9NTX5 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC19.75■□□□□ 0.75
ECHDC1Q9NTX5 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
ECHDC1Q9NTX5 KRT18P28-201ENST00000453838 1332 ntBASIC19.75■□□□□ 0.75
ECHDC1Q9NTX5 LINC02199-201ENST00000506655 2702 ntBASIC19.75■□□□□ 0.75
ECHDC1Q9NTX5 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ECHDC1Q9NTX5 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
ECHDC1Q9NTX5 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC19.74■□□□□ 0.75
ECHDC1Q9NTX5 AC112504.1-201ENST00000623415 1841 ntBASIC19.74■□□□□ 0.75
ECHDC1Q9NTX5 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
ECHDC1Q9NTX5 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
ECHDC1Q9NTX5 AL136982.4-201ENST00000437689 1740 ntBASIC19.74■□□□□ 0.75
ECHDC1Q9NTX5 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
ECHDC1Q9NTX5 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ECHDC1Q9NTX5 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC19.74■□□□□ 0.75
ECHDC1Q9NTX5 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC19.74■□□□□ 0.75
ECHDC1Q9NTX5 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
ECHDC1Q9NTX5 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
ECHDC1Q9NTX5 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ECHDC1Q9NTX5 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ECHDC1Q9NTX5 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
ECHDC1Q9NTX5 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
ECHDC1Q9NTX5 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC19.74■□□□□ 0.75
ECHDC1Q9NTX5 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC19.74■□□□□ 0.75
ECHDC1Q9NTX5 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC19.74■□□□□ 0.75
ECHDC1Q9NTX5 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC19.74■□□□□ 0.75
ECHDC1Q9NTX5 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC19.74■□□□□ 0.75
ECHDC1Q9NTX5 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC19.74■□□□□ 0.75
ECHDC1Q9NTX5 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC19.74■□□□□ 0.75
ECHDC1Q9NTX5 AC105021.1-202ENST00000570572 669 ntBASIC19.74■□□□□ 0.75
ECHDC1Q9NTX5 MIR4453-201ENST00000584019 89 ntBASIC19.74■□□□□ 0.75
ECHDC1Q9NTX5 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC19.74■□□□□ 0.75
ECHDC1Q9NTX5 AC007967.4-201ENST00000614700 386 ntBASIC19.74■□□□□ 0.75
ECHDC1Q9NTX5 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
ECHDC1Q9NTX5 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ECHDC1Q9NTX5 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
ECHDC1Q9NTX5 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC19.74■□□□□ 0.75
ECHDC1Q9NTX5 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ECHDC1Q9NTX5 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
ECHDC1Q9NTX5 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC19.74■□□□□ 0.75
ECHDC1Q9NTX5 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms