Protein–RNA interactions for Protein: Q9NRJ7

PCDHB16, Protocadherin beta-16, humanhuman

Predictions only

Length 776 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16Q9NRJ7 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
PCDHB16Q9NRJ7 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
PCDHB16Q9NRJ7 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC14.25□□□□□ -0.13
PCDHB16Q9NRJ7 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
PCDHB16Q9NRJ7 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
PCDHB16Q9NRJ7 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PCDHB16Q9NRJ7 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PCDHB16Q9NRJ7 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
PCDHB16Q9NRJ7 PI4KAP1-204ENST00000612579 1703 ntBASIC14.25□□□□□ -0.13
PCDHB16Q9NRJ7 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PCDHB16Q9NRJ7 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
PCDHB16Q9NRJ7 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
PCDHB16Q9NRJ7 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PCDHB16Q9NRJ7 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC14.25□□□□□ -0.13
PCDHB16Q9NRJ7 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC14.25□□□□□ -0.13
PCDHB16Q9NRJ7 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC14.25□□□□□ -0.13
PCDHB16Q9NRJ7 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC14.25□□□□□ -0.13
PCDHB16Q9NRJ7 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
PCDHB16Q9NRJ7 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC14.25□□□□□ -0.13
PCDHB16Q9NRJ7 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC14.25□□□□□ -0.13
PCDHB16Q9NRJ7 KRT18P56-201ENST00000507275 550 ntBASIC14.25□□□□□ -0.13
PCDHB16Q9NRJ7 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC14.25□□□□□ -0.13
PCDHB16Q9NRJ7 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
PCDHB16Q9NRJ7 IRF8-202ENST00000562492 946 ntTSL 3 BASIC14.25□□□□□ -0.13
PCDHB16Q9NRJ7 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC14.25□□□□□ -0.13
PCDHB16Q9NRJ7 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC14.25□□□□□ -0.13
PCDHB16Q9NRJ7 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PCDHB16Q9NRJ7 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC14.25□□□□□ -0.13
PCDHB16Q9NRJ7 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC14.25□□□□□ -0.13
PCDHB16Q9NRJ7 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PCDHB16Q9NRJ7 AL355877.3-201ENST00000622820 899 ntBASIC14.25□□□□□ -0.13
PCDHB16Q9NRJ7 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
PCDHB16Q9NRJ7 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PCDHB16Q9NRJ7 AC079328.2-201ENST00000561241 3354 ntBASIC14.25□□□□□ -0.13
PCDHB16Q9NRJ7 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC14.25□□□□□ -0.13
PCDHB16Q9NRJ7 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PCDHB16Q9NRJ7 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PCDHB16Q9NRJ7 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
PCDHB16Q9NRJ7 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC14.25□□□□□ -0.13
PCDHB16Q9NRJ7 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
PCDHB16Q9NRJ7 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
PCDHB16Q9NRJ7 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
PCDHB16Q9NRJ7 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
PCDHB16Q9NRJ7 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
PCDHB16Q9NRJ7 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC14.25□□□□□ -0.13
PCDHB16Q9NRJ7 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC14.25□□□□□ -0.13
PCDHB16Q9NRJ7 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC14.25□□□□□ -0.13
PCDHB16Q9NRJ7 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PCDHB16Q9NRJ7 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC14.25□□□□□ -0.13
PCDHB16Q9NRJ7 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
PCDHB16Q9NRJ7 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC14.25□□□□□ -0.13
PCDHB16Q9NRJ7 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC14.25□□□□□ -0.13
PCDHB16Q9NRJ7 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PCDHB16Q9NRJ7 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
PCDHB16Q9NRJ7 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC14.24□□□□□ -0.13
PCDHB16Q9NRJ7 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
PCDHB16Q9NRJ7 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC14.24□□□□□ -0.13
PCDHB16Q9NRJ7 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PCDHB16Q9NRJ7 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PCDHB16Q9NRJ7 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PCDHB16Q9NRJ7 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PCDHB16Q9NRJ7 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
PCDHB16Q9NRJ7 AC131009.4-201ENST00000624048 1740 ntBASIC14.24□□□□□ -0.13
PCDHB16Q9NRJ7 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PCDHB16Q9NRJ7 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PCDHB16Q9NRJ7 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
PCDHB16Q9NRJ7 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
PCDHB16Q9NRJ7 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
PCDHB16Q9NRJ7 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
PCDHB16Q9NRJ7 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PCDHB16Q9NRJ7 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PCDHB16Q9NRJ7 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PCDHB16Q9NRJ7 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
PCDHB16Q9NRJ7 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
PCDHB16Q9NRJ7 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PCDHB16Q9NRJ7 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC14.24□□□□□ -0.13
PCDHB16Q9NRJ7 STARD13-205ENST00000439831 945 ntTSL 2 BASIC14.24□□□□□ -0.13
PCDHB16Q9NRJ7 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
PCDHB16Q9NRJ7 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
PCDHB16Q9NRJ7 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC14.24□□□□□ -0.13
PCDHB16Q9NRJ7 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
PCDHB16Q9NRJ7 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC14.24□□□□□ -0.13
PCDHB16Q9NRJ7 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC14.24□□□□□ -0.13
PCDHB16Q9NRJ7 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
PCDHB16Q9NRJ7 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC14.24□□□□□ -0.13
PCDHB16Q9NRJ7 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC14.24□□□□□ -0.13
PCDHB16Q9NRJ7 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC14.24□□□□□ -0.13
PCDHB16Q9NRJ7 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
PCDHB16Q9NRJ7 MIR4492-201ENST00000581627 80 ntBASIC14.24□□□□□ -0.13
PCDHB16Q9NRJ7 AC006557.2-201ENST00000592985 1240 ntBASIC14.24□□□□□ -0.13
PCDHB16Q9NRJ7 AC004706.3-202ENST00000621574 984 ntBASIC14.24□□□□□ -0.13
PCDHB16Q9NRJ7 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
PCDHB16Q9NRJ7 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PCDHB16Q9NRJ7 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC14.24□□□□□ -0.13
PCDHB16Q9NRJ7 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
PCDHB16Q9NRJ7 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
PCDHB16Q9NRJ7 GCK-202ENST00000345378 2421 ntTSL 2 BASIC14.24□□□□□ -0.13
PCDHB16Q9NRJ7 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PCDHB16Q9NRJ7 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
PCDHB16Q9NRJ7 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms