Protein–RNA interactions for Protein: Q9NRF8

CTPS2, CTP synthase 2, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS2Q9NRF8 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CTPS2Q9NRF8 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
CTPS2Q9NRF8 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
CTPS2Q9NRF8 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CTPS2Q9NRF8 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC15.21■□□□□ 0.03
CTPS2Q9NRF8 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CTPS2Q9NRF8 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC15.21■□□□□ 0.03
CTPS2Q9NRF8 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CTPS2Q9NRF8 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC15.21■□□□□ 0.03
CTPS2Q9NRF8 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC15.21■□□□□ 0.03
CTPS2Q9NRF8 AL513477.1-201ENST00000602865 2407 ntBASIC15.21■□□□□ 0.03
CTPS2Q9NRF8 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CTPS2Q9NRF8 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CTPS2Q9NRF8 HCG4-201ENST00000418983 998 ntBASIC15.21■□□□□ 0.03
CTPS2Q9NRF8 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC15.21■□□□□ 0.03
CTPS2Q9NRF8 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC15.21■□□□□ 0.03
CTPS2Q9NRF8 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC15.21■□□□□ 0.03
CTPS2Q9NRF8 SLC25A1P1-201ENST00000528351 927 ntBASIC15.21■□□□□ 0.03
CTPS2Q9NRF8 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC15.21■□□□□ 0.03
CTPS2Q9NRF8 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC15.21■□□□□ 0.03
CTPS2Q9NRF8 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC15.21■□□□□ 0.03
CTPS2Q9NRF8 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC15.21■□□□□ 0.03
CTPS2Q9NRF8 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC15.21■□□□□ 0.03
CTPS2Q9NRF8 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CTPS2Q9NRF8 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC15.21■□□□□ 0.03
CTPS2Q9NRF8 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CTPS2Q9NRF8 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC15.21■□□□□ 0.03
CTPS2Q9NRF8 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC15.21■□□□□ 0.03
CTPS2Q9NRF8 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
CTPS2Q9NRF8 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CTPS2Q9NRF8 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
CTPS2Q9NRF8 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CTPS2Q9NRF8 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CTPS2Q9NRF8 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CTPS2Q9NRF8 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CTPS2Q9NRF8 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CTPS2Q9NRF8 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CTPS2Q9NRF8 LINC01144-201ENST00000626198 1710 ntBASIC15.2■□□□□ 0.02
CTPS2Q9NRF8 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC15.2■□□□□ 0.02
CTPS2Q9NRF8 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
CTPS2Q9NRF8 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CTPS2Q9NRF8 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
CTPS2Q9NRF8 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC15.2■□□□□ 0.02
CTPS2Q9NRF8 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CTPS2Q9NRF8 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC15.2■□□□□ 0.02
CTPS2Q9NRF8 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
CTPS2Q9NRF8 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC15.2■□□□□ 0.02
CTPS2Q9NRF8 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CTPS2Q9NRF8 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC15.2■□□□□ 0.02
CTPS2Q9NRF8 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CTPS2Q9NRF8 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
CTPS2Q9NRF8 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
CTPS2Q9NRF8 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CTPS2Q9NRF8 CRCP-205ENST00000431089 942 ntTSL 2 BASIC15.2■□□□□ 0.02
CTPS2Q9NRF8 STARD13-205ENST00000439831 945 ntTSL 2 BASIC15.2■□□□□ 0.02
CTPS2Q9NRF8 AL513480.1-201ENST00000451731 511 ntBASIC15.2■□□□□ 0.02
CTPS2Q9NRF8 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC15.2■□□□□ 0.02
CTPS2Q9NRF8 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CTPS2Q9NRF8 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC15.2■□□□□ 0.02
CTPS2Q9NRF8 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC15.2■□□□□ 0.02
CTPS2Q9NRF8 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CTPS2Q9NRF8 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
CTPS2Q9NRF8 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CTPS2Q9NRF8 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
CTPS2Q9NRF8 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CTPS2Q9NRF8 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC15.2■□□□□ 0.02
CTPS2Q9NRF8 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CTPS2Q9NRF8 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CTPS2Q9NRF8 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC15.19■□□□□ 0.02
CTPS2Q9NRF8 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
CTPS2Q9NRF8 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC15.19■□□□□ 0.02
CTPS2Q9NRF8 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC15.19■□□□□ 0.02
CTPS2Q9NRF8 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CTPS2Q9NRF8 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
CTPS2Q9NRF8 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC15.19■□□□□ 0.02
CTPS2Q9NRF8 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
CTPS2Q9NRF8 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC15.19■□□□□ 0.02
CTPS2Q9NRF8 AC012569.1-201ENST00000591191 1524 ntBASIC15.19■□□□□ 0.02
CTPS2Q9NRF8 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
CTPS2Q9NRF8 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CTPS2Q9NRF8 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CTPS2Q9NRF8 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CTPS2Q9NRF8 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC15.19■□□□□ 0.02
CTPS2Q9NRF8 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC15.19■□□□□ 0.02
CTPS2Q9NRF8 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
CTPS2Q9NRF8 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CTPS2Q9NRF8 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC15.19■□□□□ 0.02
CTPS2Q9NRF8 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
CTPS2Q9NRF8 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
CTPS2Q9NRF8 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
CTPS2Q9NRF8 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC15.19■□□□□ 0.02
CTPS2Q9NRF8 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC15.19■□□□□ 0.02
CTPS2Q9NRF8 AC007967.2-201ENST00000432613 625 ntBASIC15.19■□□□□ 0.02
CTPS2Q9NRF8 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC15.19■□□□□ 0.02
CTPS2Q9NRF8 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC15.19■□□□□ 0.02
CTPS2Q9NRF8 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC15.19■□□□□ 0.02
CTPS2Q9NRF8 CD63-210ENST00000550776 870 ntTSL 5 BASIC15.19■□□□□ 0.02
CTPS2Q9NRF8 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC15.19■□□□□ 0.02
CTPS2Q9NRF8 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC15.19■□□□□ 0.02
CTPS2Q9NRF8 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 58.9 ms