Protein–RNA interactions for Protein: Q9HCJ2

LRRC4C, Leucine-rich repeat-containing protein 4C, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC4CQ9HCJ2 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LRRC4CQ9HCJ2 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC16.76■□□□□ 0.27
LRRC4CQ9HCJ2 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
LRRC4CQ9HCJ2 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
LRRC4CQ9HCJ2 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LRRC4CQ9HCJ2 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
LRRC4CQ9HCJ2 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
LRRC4CQ9HCJ2 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC16.76■□□□□ 0.27
LRRC4CQ9HCJ2 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
LRRC4CQ9HCJ2 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
LRRC4CQ9HCJ2 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC16.76■□□□□ 0.27
LRRC4CQ9HCJ2 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC16.75■□□□□ 0.27
LRRC4CQ9HCJ2 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
LRRC4CQ9HCJ2 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
LRRC4CQ9HCJ2 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC16.75■□□□□ 0.27
LRRC4CQ9HCJ2 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
LRRC4CQ9HCJ2 C1R-202ENST00000536053 2347 ntTSL 2 BASIC16.75■□□□□ 0.27
LRRC4CQ9HCJ2 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
LRRC4CQ9HCJ2 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC16.75■□□□□ 0.27
LRRC4CQ9HCJ2 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
LRRC4CQ9HCJ2 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LRRC4CQ9HCJ2 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC16.75■□□□□ 0.27
LRRC4CQ9HCJ2 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LRRC4CQ9HCJ2 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC16.75■□□□□ 0.27
LRRC4CQ9HCJ2 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC16.75■□□□□ 0.27
LRRC4CQ9HCJ2 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC16.75■□□□□ 0.27
LRRC4CQ9HCJ2 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC16.75■□□□□ 0.27
LRRC4CQ9HCJ2 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
LRRC4CQ9HCJ2 GGCT-205ENST00000409436 954 ntTSL 3 BASIC16.75■□□□□ 0.27
LRRC4CQ9HCJ2 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
LRRC4CQ9HCJ2 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
LRRC4CQ9HCJ2 COX10-202ENST00000429152 875 ntTSL 2 BASIC16.75■□□□□ 0.27
LRRC4CQ9HCJ2 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC16.75■□□□□ 0.27
LRRC4CQ9HCJ2 FGFR3P6-201ENST00000457012 610 ntBASIC16.75■□□□□ 0.27
LRRC4CQ9HCJ2 AC093909.1-201ENST00000504731 1122 ntBASIC16.75■□□□□ 0.27
LRRC4CQ9HCJ2 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC16.75■□□□□ 0.27
LRRC4CQ9HCJ2 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
LRRC4CQ9HCJ2 AC087641.1-201ENST00000557561 1021 ntBASIC16.75■□□□□ 0.27
LRRC4CQ9HCJ2 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC16.75■□□□□ 0.27
LRRC4CQ9HCJ2 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC16.75■□□□□ 0.27
LRRC4CQ9HCJ2 BSG-214ENST00000614867 960 ntTSL 3 BASIC16.75■□□□□ 0.27
LRRC4CQ9HCJ2 AL805961.1-202ENST00000641562 540 ntBASIC16.75■□□□□ 0.27
LRRC4CQ9HCJ2 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC16.75■□□□□ 0.27
LRRC4CQ9HCJ2 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
LRRC4CQ9HCJ2 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
LRRC4CQ9HCJ2 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LRRC4CQ9HCJ2 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
LRRC4CQ9HCJ2 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
LRRC4CQ9HCJ2 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
LRRC4CQ9HCJ2 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LRRC4CQ9HCJ2 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LRRC4CQ9HCJ2 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
LRRC4CQ9HCJ2 CICP13-201ENST00000422015 2789 ntBASIC16.75■□□□□ 0.27
LRRC4CQ9HCJ2 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LRRC4CQ9HCJ2 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
LRRC4CQ9HCJ2 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LRRC4CQ9HCJ2 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
LRRC4CQ9HCJ2 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
LRRC4CQ9HCJ2 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LRRC4CQ9HCJ2 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LRRC4CQ9HCJ2 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC16.74■□□□□ 0.27
LRRC4CQ9HCJ2 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
LRRC4CQ9HCJ2 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC16.74■□□□□ 0.27
LRRC4CQ9HCJ2 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
LRRC4CQ9HCJ2 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
LRRC4CQ9HCJ2 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC16.74■□□□□ 0.27
LRRC4CQ9HCJ2 ELK2BP-201ENST00000415014 1224 ntBASIC16.74■□□□□ 0.27
LRRC4CQ9HCJ2 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC16.74■□□□□ 0.27
LRRC4CQ9HCJ2 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC16.74■□□□□ 0.27
LRRC4CQ9HCJ2 MSRA-206ENST00000521209 814 ntTSL 3 BASIC16.74■□□□□ 0.27
LRRC4CQ9HCJ2 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC16.74■□□□□ 0.27
LRRC4CQ9HCJ2 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC16.74■□□□□ 0.27
LRRC4CQ9HCJ2 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC16.74■□□□□ 0.27
LRRC4CQ9HCJ2 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
LRRC4CQ9HCJ2 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC16.74■□□□□ 0.27
LRRC4CQ9HCJ2 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LRRC4CQ9HCJ2 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC16.74■□□□□ 0.27
LRRC4CQ9HCJ2 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC16.74■□□□□ 0.27
LRRC4CQ9HCJ2 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LRRC4CQ9HCJ2 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC16.74■□□□□ 0.27
LRRC4CQ9HCJ2 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LRRC4CQ9HCJ2 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
LRRC4CQ9HCJ2 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
LRRC4CQ9HCJ2 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC16.74■□□□□ 0.27
LRRC4CQ9HCJ2 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
LRRC4CQ9HCJ2 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC16.74■□□□□ 0.27
LRRC4CQ9HCJ2 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LRRC4CQ9HCJ2 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
LRRC4CQ9HCJ2 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC16.74■□□□□ 0.27
LRRC4CQ9HCJ2 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC16.74■□□□□ 0.27
LRRC4CQ9HCJ2 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC16.74■□□□□ 0.27
LRRC4CQ9HCJ2 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
LRRC4CQ9HCJ2 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC16.73■□□□□ 0.27
LRRC4CQ9HCJ2 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC16.73■□□□□ 0.27
LRRC4CQ9HCJ2 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC16.73■□□□□ 0.27
LRRC4CQ9HCJ2 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
LRRC4CQ9HCJ2 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC16.73■□□□□ 0.27
LRRC4CQ9HCJ2 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
LRRC4CQ9HCJ2 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LRRC4CQ9HCJ2 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 56.6 ms