Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
BRF2Q9HAW0 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC15.56■□□□□ 0.08
BRF2Q9HAW0 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC15.56■□□□□ 0.08
BRF2Q9HAW0 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC15.56■□□□□ 0.08
BRF2Q9HAW0 HLA-DQB2-231ENST00000435145 2026 ntBASIC15.56■□□□□ 0.08
BRF2Q9HAW0 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
BRF2Q9HAW0 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
BRF2Q9HAW0 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
BRF2Q9HAW0 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
BRF2Q9HAW0 AL162727.3-201ENST00000635661 2787 ntBASIC15.56■□□□□ 0.08
BRF2Q9HAW0 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
BRF2Q9HAW0 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
BRF2Q9HAW0 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
BRF2Q9HAW0 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
BRF2Q9HAW0 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
BRF2Q9HAW0 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
BRF2Q9HAW0 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
BRF2Q9HAW0 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC15.55■□□□□ 0.08
BRF2Q9HAW0 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC15.55■□□□□ 0.08
BRF2Q9HAW0 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
BRF2Q9HAW0 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
BRF2Q9HAW0 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC15.55■□□□□ 0.08
BRF2Q9HAW0 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC15.55■□□□□ 0.08
BRF2Q9HAW0 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
BRF2Q9HAW0 LTF-203ENST00000426532 2494 ntTSL 2 BASIC15.55■□□□□ 0.08
BRF2Q9HAW0 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
BRF2Q9HAW0 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
BRF2Q9HAW0 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
BRF2Q9HAW0 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
BRF2Q9HAW0 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
BRF2Q9HAW0 AC011477.6-201ENST00000604980 1927 ntBASIC15.55■□□□□ 0.08
BRF2Q9HAW0 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC15.55■□□□□ 0.08
BRF2Q9HAW0 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
BRF2Q9HAW0 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
BRF2Q9HAW0 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
BRF2Q9HAW0 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC15.55■□□□□ 0.08
BRF2Q9HAW0 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC15.55■□□□□ 0.08
BRF2Q9HAW0 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC15.55■□□□□ 0.08
BRF2Q9HAW0 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
BRF2Q9HAW0 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
BRF2Q9HAW0 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
BRF2Q9HAW0 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
BRF2Q9HAW0 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
BRF2Q9HAW0 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
BRF2Q9HAW0 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC15.55■□□□□ 0.08
BRF2Q9HAW0 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
BRF2Q9HAW0 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC15.55■□□□□ 0.08
BRF2Q9HAW0 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
BRF2Q9HAW0 RN7SL589P-201ENST00000481268 310 ntBASIC15.55■□□□□ 0.08
BRF2Q9HAW0 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC15.55■□□□□ 0.08
BRF2Q9HAW0 INO80E-210ENST00000567705 880 ntTSL 3 BASIC15.55■□□□□ 0.08
BRF2Q9HAW0 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC15.55■□□□□ 0.08
BRF2Q9HAW0 AC024267.1-201ENST00000582320 895 ntBASIC15.55■□□□□ 0.08
BRF2Q9HAW0 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
BRF2Q9HAW0 AC008267.7-201ENST00000624570 1194 ntBASIC15.55■□□□□ 0.08
BRF2Q9HAW0 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC15.55■□□□□ 0.08
BRF2Q9HAW0 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
BRF2Q9HAW0 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
BRF2Q9HAW0 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC15.55■□□□□ 0.08
BRF2Q9HAW0 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
BRF2Q9HAW0 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
BRF2Q9HAW0 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
BRF2Q9HAW0 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
BRF2Q9HAW0 FLJ16779-201ENST00000612722 7638 ntBASIC15.55■□□□□ 0.08
BRF2Q9HAW0 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
BRF2Q9HAW0 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
BRF2Q9HAW0 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
BRF2Q9HAW0 VILL-207ENST00000465644 1857 ntTSL 5 BASIC15.54■□□□□ 0.08
BRF2Q9HAW0 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC15.54■□□□□ 0.08
BRF2Q9HAW0 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
BRF2Q9HAW0 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
BRF2Q9HAW0 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
BRF2Q9HAW0 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
BRF2Q9HAW0 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC15.54■□□□□ 0.08
BRF2Q9HAW0 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
BRF2Q9HAW0 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
BRF2Q9HAW0 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC15.54■□□□□ 0.08
BRF2Q9HAW0 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
BRF2Q9HAW0 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
BRF2Q9HAW0 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
BRF2Q9HAW0 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
BRF2Q9HAW0 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC15.54■□□□□ 0.08
BRF2Q9HAW0 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
BRF2Q9HAW0 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
BRF2Q9HAW0 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC15.54■□□□□ 0.08
BRF2Q9HAW0 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
BRF2Q9HAW0 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC15.54■□□□□ 0.08
BRF2Q9HAW0 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
BRF2Q9HAW0 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC15.54■□□□□ 0.08
BRF2Q9HAW0 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
BRF2Q9HAW0 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC15.54■□□□□ 0.08
BRF2Q9HAW0 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC15.54■□□□□ 0.08
BRF2Q9HAW0 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC15.54■□□□□ 0.08
BRF2Q9HAW0 TFAMP1-201ENST00000412727 736 ntBASIC15.54■□□□□ 0.08
BRF2Q9HAW0 GPX1P2-201ENST00000429271 606 ntBASIC15.54■□□□□ 0.08
BRF2Q9HAW0 AL671277.1-201ENST00000429656 993 ntBASIC15.54■□□□□ 0.08
BRF2Q9HAW0 NMU-202ENST00000505262 693 ntTSL 3 BASIC15.54■□□□□ 0.08
BRF2Q9HAW0 AL135744.1-201ENST00000565098 629 ntBASIC15.54■□□□□ 0.08
BRF2Q9HAW0 IGHV3OR16-6-201ENST00000568775 360 ntBASIC15.54■□□□□ 0.08
BRF2Q9HAW0 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 63 ms