Protein–RNA interactions for Protein: Q9H422

HIPK3, Homeodomain-interacting protein kinase 3, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3Q9H422 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
HIPK3Q9H422 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HIPK3Q9H422 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC17.66■□□□□ 0.42
HIPK3Q9H422 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HIPK3Q9H422 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC17.66■□□□□ 0.42
HIPK3Q9H422 TUBB1P2-201ENST00000422712 1306 ntBASIC17.66■□□□□ 0.42
HIPK3Q9H422 TUBB1P1-201ENST00000503144 1300 ntBASIC17.66■□□□□ 0.42
HIPK3Q9H422 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
HIPK3Q9H422 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC17.66■□□□□ 0.42
HIPK3Q9H422 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
HIPK3Q9H422 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC17.66■□□□□ 0.42
HIPK3Q9H422 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
HIPK3Q9H422 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HIPK3Q9H422 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
HIPK3Q9H422 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HIPK3Q9H422 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
HIPK3Q9H422 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HIPK3Q9H422 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
HIPK3Q9H422 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HIPK3Q9H422 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
HIPK3Q9H422 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HIPK3Q9H422 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HIPK3Q9H422 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HIPK3Q9H422 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
HIPK3Q9H422 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
HIPK3Q9H422 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC17.65■□□□□ 0.42
HIPK3Q9H422 BCYRN1-201ENST00000418539 200 ntBASIC17.65■□□□□ 0.42
HIPK3Q9H422 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
HIPK3Q9H422 CD74-212ENST00000524315 584 ntTSL 5 BASIC17.65■□□□□ 0.42
HIPK3Q9H422 AL158212.4-201ENST00000624062 1286 ntBASIC17.65■□□□□ 0.42
HIPK3Q9H422 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
HIPK3Q9H422 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC17.65■□□□□ 0.42
HIPK3Q9H422 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
HIPK3Q9H422 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
HIPK3Q9H422 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
HIPK3Q9H422 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC17.65■□□□□ 0.42
HIPK3Q9H422 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
HIPK3Q9H422 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HIPK3Q9H422 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
HIPK3Q9H422 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
HIPK3Q9H422 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HIPK3Q9H422 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
HIPK3Q9H422 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HIPK3Q9H422 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HIPK3Q9H422 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
HIPK3Q9H422 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC17.65■□□□□ 0.42
HIPK3Q9H422 U82695.1-201ENST00000635752 1889 ntBASIC17.65■□□□□ 0.42
HIPK3Q9H422 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
HIPK3Q9H422 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC17.64■□□□□ 0.42
HIPK3Q9H422 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
HIPK3Q9H422 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC17.64■□□□□ 0.42
HIPK3Q9H422 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.42
HIPK3Q9H422 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC17.64■□□□□ 0.41
HIPK3Q9H422 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
HIPK3Q9H422 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HIPK3Q9H422 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC17.64■□□□□ 0.41
HIPK3Q9H422 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
HIPK3Q9H422 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HIPK3Q9H422 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HIPK3Q9H422 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC17.64■□□□□ 0.41
HIPK3Q9H422 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
HIPK3Q9H422 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC17.64■□□□□ 0.41
HIPK3Q9H422 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
HIPK3Q9H422 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC17.64■□□□□ 0.41
HIPK3Q9H422 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC17.64■□□□□ 0.41
HIPK3Q9H422 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
HIPK3Q9H422 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC17.64■□□□□ 0.41
HIPK3Q9H422 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC17.64■□□□□ 0.41
HIPK3Q9H422 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
HIPK3Q9H422 SPIB-207ENST00000597855 564 ntTSL 4 BASIC17.64■□□□□ 0.41
HIPK3Q9H422 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC17.64■□□□□ 0.41
HIPK3Q9H422 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
HIPK3Q9H422 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HIPK3Q9H422 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
HIPK3Q9H422 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
HIPK3Q9H422 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC17.64■□□□□ 0.41
HIPK3Q9H422 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HIPK3Q9H422 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
HIPK3Q9H422 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
HIPK3Q9H422 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC17.64■□□□□ 0.41
HIPK3Q9H422 AC020907.1-201ENST00000616460 1350 ntBASIC17.64■□□□□ 0.41
HIPK3Q9H422 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
HIPK3Q9H422 AC005622.1-201ENST00000636801 1703 ntBASIC17.64■□□□□ 0.41
HIPK3Q9H422 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HIPK3Q9H422 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HIPK3Q9H422 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
HIPK3Q9H422 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC17.63■□□□□ 0.41
HIPK3Q9H422 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HIPK3Q9H422 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
HIPK3Q9H422 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HIPK3Q9H422 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC17.63■□□□□ 0.41
HIPK3Q9H422 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
HIPK3Q9H422 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
HIPK3Q9H422 PCGF3-213ENST00000620529 1899 ntBASIC17.63■□□□□ 0.41
HIPK3Q9H422 EML3-212ENST00000494176 2901 ntTSL 2 BASIC17.63■□□□□ 0.41
HIPK3Q9H422 EML3-216ENST00000529309 2909 ntTSL 2 BASIC17.63■□□□□ 0.41
HIPK3Q9H422 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
HIPK3Q9H422 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
HIPK3Q9H422 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
HIPK3Q9H422 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 56.3 ms