Protein–RNA interactions for Protein: Q9H239

MMP28, Matrix metalloproteinase-28, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28Q9H239 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
MMP28Q9H239 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
MMP28Q9H239 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
MMP28Q9H239 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC14.45□□□□□ -0.1
MMP28Q9H239 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
MMP28Q9H239 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
MMP28Q9H239 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
MMP28Q9H239 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC14.45□□□□□ -0.1
MMP28Q9H239 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC14.45□□□□□ -0.1
MMP28Q9H239 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC14.45□□□□□ -0.1
MMP28Q9H239 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC14.45□□□□□ -0.1
MMP28Q9H239 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
MMP28Q9H239 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC14.45□□□□□ -0.1
MMP28Q9H239 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
MMP28Q9H239 AC005336.2-201ENST00000593183 939 ntBASIC14.45□□□□□ -0.1
MMP28Q9H239 AL138831.2-201ENST00000606564 490 ntBASIC14.45□□□□□ -0.1
MMP28Q9H239 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
MMP28Q9H239 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC14.45□□□□□ -0.1
MMP28Q9H239 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC14.45□□□□□ -0.1
MMP28Q9H239 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
MMP28Q9H239 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
MMP28Q9H239 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
MMP28Q9H239 AC007191.1-201ENST00000623179 2995 ntBASIC14.45□□□□□ -0.1
MMP28Q9H239 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC14.45□□□□□ -0.1
MMP28Q9H239 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC14.45□□□□□ -0.1
MMP28Q9H239 COCH-203ENST00000460581 2688 ntTSL 2 BASIC14.45□□□□□ -0.1
MMP28Q9H239 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC14.45□□□□□ -0.1
MMP28Q9H239 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
MMP28Q9H239 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
MMP28Q9H239 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
MMP28Q9H239 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC14.45□□□□□ -0.1
MMP28Q9H239 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC14.44□□□□□ -0.1
MMP28Q9H239 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC14.44□□□□□ -0.1
MMP28Q9H239 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
MMP28Q9H239 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
MMP28Q9H239 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
MMP28Q9H239 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
MMP28Q9H239 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
MMP28Q9H239 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
MMP28Q9H239 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
MMP28Q9H239 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
MMP28Q9H239 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
MMP28Q9H239 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
MMP28Q9H239 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
MMP28Q9H239 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC14.44□□□□□ -0.1
MMP28Q9H239 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
MMP28Q9H239 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
MMP28Q9H239 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
MMP28Q9H239 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
MMP28Q9H239 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
MMP28Q9H239 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC14.44□□□□□ -0.1
MMP28Q9H239 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
MMP28Q9H239 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
MMP28Q9H239 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
MMP28Q9H239 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
MMP28Q9H239 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC14.44□□□□□ -0.1
MMP28Q9H239 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
MMP28Q9H239 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
MMP28Q9H239 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC14.44□□□□□ -0.1
MMP28Q9H239 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC14.44□□□□□ -0.1
MMP28Q9H239 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC14.44□□□□□ -0.1
MMP28Q9H239 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
MMP28Q9H239 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC14.44□□□□□ -0.1
MMP28Q9H239 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC14.44□□□□□ -0.1
MMP28Q9H239 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
MMP28Q9H239 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC14.44□□□□□ -0.1
MMP28Q9H239 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
MMP28Q9H239 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
MMP28Q9H239 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC14.44□□□□□ -0.1
MMP28Q9H239 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
MMP28Q9H239 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
MMP28Q9H239 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
MMP28Q9H239 OR2I1P-210ENST00000642037 4691 ntBASIC14.44□□□□□ -0.1
MMP28Q9H239 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC14.44□□□□□ -0.1
MMP28Q9H239 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
MMP28Q9H239 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
MMP28Q9H239 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
MMP28Q9H239 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC14.44□□□□□ -0.1
MMP28Q9H239 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
MMP28Q9H239 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC14.44□□□□□ -0.1
MMP28Q9H239 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
MMP28Q9H239 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
MMP28Q9H239 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC14.44□□□□□ -0.1
MMP28Q9H239 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC14.43□□□□□ -0.1
MMP28Q9H239 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
MMP28Q9H239 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
MMP28Q9H239 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
MMP28Q9H239 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
MMP28Q9H239 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
MMP28Q9H239 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
MMP28Q9H239 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC14.43□□□□□ -0.1
MMP28Q9H239 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
MMP28Q9H239 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
MMP28Q9H239 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC14.43□□□□□ -0.1
MMP28Q9H239 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC14.43□□□□□ -0.1
MMP28Q9H239 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
MMP28Q9H239 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
MMP28Q9H239 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
MMP28Q9H239 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
MMP28Q9H239 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms