Protein–RNA interactions for Protein: Q9BZA7

PCDH11X, Protocadherin-11 X-linked, humanhuman

Predictions only

Length 1,347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11XQ9BZA7 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC20.83■□□□□ 0.93
PCDH11XQ9BZA7 RN7SL219P-201ENST00000582872 296 ntBASIC20.83■□□□□ 0.93
PCDH11XQ9BZA7 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC20.83■□□□□ 0.93
PCDH11XQ9BZA7 MIR6869-201ENST00000619434 62 ntBASIC20.83■□□□□ 0.93
PCDH11XQ9BZA7 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
PCDH11XQ9BZA7 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
PCDH11XQ9BZA7 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC20.83■□□□□ 0.93
PCDH11XQ9BZA7 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC20.83■□□□□ 0.93
PCDH11XQ9BZA7 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PCDH11XQ9BZA7 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
PCDH11XQ9BZA7 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
PCDH11XQ9BZA7 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
PCDH11XQ9BZA7 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
PCDH11XQ9BZA7 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC20.83■□□□□ 0.92
PCDH11XQ9BZA7 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC20.83■□□□□ 0.92
PCDH11XQ9BZA7 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
PCDH11XQ9BZA7 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
PCDH11XQ9BZA7 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC20.83■□□□□ 0.92
PCDH11XQ9BZA7 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
PCDH11XQ9BZA7 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.92
PCDH11XQ9BZA7 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.92
PCDH11XQ9BZA7 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PCDH11XQ9BZA7 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
PCDH11XQ9BZA7 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PCDH11XQ9BZA7 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PCDH11XQ9BZA7 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PCDH11XQ9BZA7 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC20.82■□□□□ 0.92
PCDH11XQ9BZA7 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC20.82■□□□□ 0.92
PCDH11XQ9BZA7 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PCDH11XQ9BZA7 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC20.82■□□□□ 0.92
PCDH11XQ9BZA7 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
PCDH11XQ9BZA7 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC20.82■□□□□ 0.92
PCDH11XQ9BZA7 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC20.82■□□□□ 0.92
PCDH11XQ9BZA7 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC20.82■□□□□ 0.92
PCDH11XQ9BZA7 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PCDH11XQ9BZA7 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC20.82■□□□□ 0.92
PCDH11XQ9BZA7 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PCDH11XQ9BZA7 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PCDH11XQ9BZA7 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC20.82■□□□□ 0.92
PCDH11XQ9BZA7 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC20.82■□□□□ 0.92
PCDH11XQ9BZA7 TP73-213ENST00000604479 1623 ntTSL 5 BASIC20.82■□□□□ 0.92
PCDH11XQ9BZA7 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC20.82■□□□□ 0.92
PCDH11XQ9BZA7 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PCDH11XQ9BZA7 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
PCDH11XQ9BZA7 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
PCDH11XQ9BZA7 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PCDH11XQ9BZA7 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PCDH11XQ9BZA7 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PCDH11XQ9BZA7 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
PCDH11XQ9BZA7 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PCDH11XQ9BZA7 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
PCDH11XQ9BZA7 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PCDH11XQ9BZA7 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
PCDH11XQ9BZA7 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PCDH11XQ9BZA7 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PCDH11XQ9BZA7 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC20.81■□□□□ 0.92
PCDH11XQ9BZA7 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PCDH11XQ9BZA7 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PCDH11XQ9BZA7 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PCDH11XQ9BZA7 AL355864.2-201ENST00000447420 863 ntBASIC20.81■□□□□ 0.92
PCDH11XQ9BZA7 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC20.81■□□□□ 0.92
PCDH11XQ9BZA7 AP000812.2-201ENST00000538934 718 ntBASIC20.81■□□□□ 0.92
PCDH11XQ9BZA7 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PCDH11XQ9BZA7 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PCDH11XQ9BZA7 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
PCDH11XQ9BZA7 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC20.81■□□□□ 0.92
PCDH11XQ9BZA7 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PCDH11XQ9BZA7 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
PCDH11XQ9BZA7 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC20.81■□□□□ 0.92
PCDH11XQ9BZA7 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
PCDH11XQ9BZA7 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC20.81■□□□□ 0.92
PCDH11XQ9BZA7 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC20.81■□□□□ 0.92
PCDH11XQ9BZA7 UBALD1-205ENST00000590891 2641 ntBASIC20.81■□□□□ 0.92
PCDH11XQ9BZA7 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC20.81■□□□□ 0.92
PCDH11XQ9BZA7 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
PCDH11XQ9BZA7 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PCDH11XQ9BZA7 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
PCDH11XQ9BZA7 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
PCDH11XQ9BZA7 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PCDH11XQ9BZA7 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PCDH11XQ9BZA7 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
PCDH11XQ9BZA7 GZMB-202ENST00000382540 816 ntTSL 5 BASIC20.8■□□□□ 0.92
PCDH11XQ9BZA7 C1QBPP1-201ENST00000400117 770 ntBASIC20.8■□□□□ 0.92
PCDH11XQ9BZA7 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
PCDH11XQ9BZA7 FAM21FP-201ENST00000426241 1131 ntBASIC20.8■□□□□ 0.92
PCDH11XQ9BZA7 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC20.8■□□□□ 0.92
PCDH11XQ9BZA7 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PCDH11XQ9BZA7 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC20.8■□□□□ 0.92
PCDH11XQ9BZA7 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC20.8■□□□□ 0.92
PCDH11XQ9BZA7 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PCDH11XQ9BZA7 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC20.8■□□□□ 0.92
PCDH11XQ9BZA7 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC20.8■□□□□ 0.92
PCDH11XQ9BZA7 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC20.8■□□□□ 0.92
PCDH11XQ9BZA7 MIR6787-201ENST00000616675 61 ntBASIC20.8■□□□□ 0.92
PCDH11XQ9BZA7 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC20.8■□□□□ 0.92
PCDH11XQ9BZA7 SNX12-206ENST00000622259 661 ntTSL 5 BASIC20.8■□□□□ 0.92
PCDH11XQ9BZA7 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PCDH11XQ9BZA7 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PCDH11XQ9BZA7 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PCDH11XQ9BZA7 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 56.7 ms