Protein–RNA interactions for Protein: Q9BYR8

KRTAP3-1, Keratin-associated protein 3-1, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-1Q9BYR8 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC8.31□□□□□ -1.08
KRTAP3-1Q9BYR8 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC8.31□□□□□ -1.08
KRTAP3-1Q9BYR8 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
KRTAP3-1Q9BYR8 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
KRTAP3-1Q9BYR8 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC8.31□□□□□ -1.08
KRTAP3-1Q9BYR8 AC006455.6-201ENST00000426192 893 ntBASIC8.31□□□□□ -1.08
KRTAP3-1Q9BYR8 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC8.31□□□□□ -1.08
KRTAP3-1Q9BYR8 MMP17-203ENST00000535004 719 ntTSL 3 BASIC8.31□□□□□ -1.08
KRTAP3-1Q9BYR8 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC8.31□□□□□ -1.08
KRTAP3-1Q9BYR8 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC8.31□□□□□ -1.08
KRTAP3-1Q9BYR8 AL158211.1-201ENST00000566763 763 ntBASIC8.31□□□□□ -1.08
KRTAP3-1Q9BYR8 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC8.31□□□□□ -1.08
KRTAP3-1Q9BYR8 AC002558.2-201ENST00000572193 673 ntTSL 3 BASIC8.31□□□□□ -1.08
KRTAP3-1Q9BYR8 CYGB-205ENST00000590175 830 ntTSL 3 BASIC8.31□□□□□ -1.08
KRTAP3-1Q9BYR8 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC8.31□□□□□ -1.08
KRTAP3-1Q9BYR8 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
KRTAP3-1Q9BYR8 WT1-AS_2.1-201ENST00000613208 137 ntBASIC8.31□□□□□ -1.08
KRTAP3-1Q9BYR8 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC8.31□□□□□ -1.08
KRTAP3-1Q9BYR8 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC8.31□□□□□ -1.08
KRTAP3-1Q9BYR8 AC109809.1-201ENST00000619665 545 ntBASIC8.31□□□□□ -1.08
KRTAP3-1Q9BYR8 BCL10-202ENST00000620248 774 ntTSL 5 BASIC8.31□□□□□ -1.08
KRTAP3-1Q9BYR8 AC090506.2-201ENST00000624521 419 ntBASIC8.31□□□□□ -1.08
KRTAP3-1Q9BYR8 AL590396.2-201ENST00000636511 1041 ntBASIC8.31□□□□□ -1.08
KRTAP3-1Q9BYR8 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC8.31□□□□□ -1.08
KRTAP3-1Q9BYR8 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC8.31□□□□□ -1.08
KRTAP3-1Q9BYR8 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
KRTAP3-1Q9BYR8 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC8.31□□□□□ -1.08
KRTAP3-1Q9BYR8 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC8.31□□□□□ -1.08
KRTAP3-1Q9BYR8 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
KRTAP3-1Q9BYR8 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC8.31□□□□□ -1.08
KRTAP3-1Q9BYR8 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC8.31□□□□□ -1.08
KRTAP3-1Q9BYR8 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
KRTAP3-1Q9BYR8 POLL-217ENST00000628479 1953 ntTSL 5 BASIC8.31□□□□□ -1.08
KRTAP3-1Q9BYR8 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC8.31□□□□□ -1.08
KRTAP3-1Q9BYR8 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
KRTAP3-1Q9BYR8 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
KRTAP3-1Q9BYR8 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC8.31□□□□□ -1.08
KRTAP3-1Q9BYR8 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC8.31□□□□□ -1.08
KRTAP3-1Q9BYR8 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC8.31□□□□□ -1.08
KRTAP3-1Q9BYR8 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC8.31□□□□□ -1.08
KRTAP3-1Q9BYR8 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC8.31□□□□□ -1.08
KRTAP3-1Q9BYR8 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
KRTAP3-1Q9BYR8 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC8.31□□□□□ -1.08
KRTAP3-1Q9BYR8 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC8.31□□□□□ -1.08
KRTAP3-1Q9BYR8 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
KRTAP3-1Q9BYR8 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
KRTAP3-1Q9BYR8 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
KRTAP3-1Q9BYR8 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
KRTAP3-1Q9BYR8 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
KRTAP3-1Q9BYR8 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC8.31□□□□□ -1.08
KRTAP3-1Q9BYR8 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC8.31□□□□□ -1.08
KRTAP3-1Q9BYR8 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
KRTAP3-1Q9BYR8 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
KRTAP3-1Q9BYR8 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
KRTAP3-1Q9BYR8 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
KRTAP3-1Q9BYR8 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
KRTAP3-1Q9BYR8 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC8.3□□□□□ -1.08
KRTAP3-1Q9BYR8 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
KRTAP3-1Q9BYR8 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC8.3□□□□□ -1.08
KRTAP3-1Q9BYR8 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC8.3□□□□□ -1.08
KRTAP3-1Q9BYR8 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
KRTAP3-1Q9BYR8 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
KRTAP3-1Q9BYR8 RELA-227ENST00000615805 2236 ntTSL 5 BASIC8.3□□□□□ -1.08
KRTAP3-1Q9BYR8 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC8.3□□□□□ -1.08
KRTAP3-1Q9BYR8 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
KRTAP3-1Q9BYR8 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC8.3□□□□□ -1.08
KRTAP3-1Q9BYR8 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC8.3□□□□□ -1.08
KRTAP3-1Q9BYR8 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC8.3□□□□□ -1.08
KRTAP3-1Q9BYR8 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
KRTAP3-1Q9BYR8 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC8.3□□□□□ -1.08
KRTAP3-1Q9BYR8 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
KRTAP3-1Q9BYR8 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
KRTAP3-1Q9BYR8 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC8.3□□□□□ -1.08
KRTAP3-1Q9BYR8 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC8.3□□□□□ -1.08
KRTAP3-1Q9BYR8 MECR-202ENST00000373791 2416 ntTSL 2 BASIC8.3□□□□□ -1.08
KRTAP3-1Q9BYR8 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
KRTAP3-1Q9BYR8 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
KRTAP3-1Q9BYR8 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
KRTAP3-1Q9BYR8 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
KRTAP3-1Q9BYR8 FAM45BP-202ENST00000592932 1624 ntBASIC8.3□□□□□ -1.08
KRTAP3-1Q9BYR8 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC8.3□□□□□ -1.08
KRTAP3-1Q9BYR8 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
KRTAP3-1Q9BYR8 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC8.3□□□□□ -1.08
KRTAP3-1Q9BYR8 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC8.3□□□□□ -1.08
KRTAP3-1Q9BYR8 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
KRTAP3-1Q9BYR8 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
KRTAP3-1Q9BYR8 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC8.3□□□□□ -1.08
KRTAP3-1Q9BYR8 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC8.3□□□□□ -1.08
KRTAP3-1Q9BYR8 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC8.3□□□□□ -1.08
KRTAP3-1Q9BYR8 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC8.3□□□□□ -1.08
KRTAP3-1Q9BYR8 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
KRTAP3-1Q9BYR8 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC8.3□□□□□ -1.08
KRTAP3-1Q9BYR8 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
KRTAP3-1Q9BYR8 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
KRTAP3-1Q9BYR8 PGGT1BP2-201ENST00000398621 1028 ntBASIC8.3□□□□□ -1.08
KRTAP3-1Q9BYR8 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
KRTAP3-1Q9BYR8 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC8.3□□□□□ -1.08
KRTAP3-1Q9BYR8 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC8.3□□□□□ -1.08
KRTAP3-1Q9BYR8 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC8.3□□□□□ -1.08
KRTAP3-1Q9BYR8 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC8.3□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms