Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
KRTAP4-3Q9BYR4 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
KRTAP4-3Q9BYR4 AC007541.1-201ENST00000570282 1469 ntBASIC5.51□□□□□ -1.53
KRTAP4-3Q9BYR4 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC5.51□□□□□ -1.53
KRTAP4-3Q9BYR4 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
KRTAP4-3Q9BYR4 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC5.51□□□□□ -1.53
KRTAP4-3Q9BYR4 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
KRTAP4-3Q9BYR4 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC5.51□□□□□ -1.53
KRTAP4-3Q9BYR4 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
KRTAP4-3Q9BYR4 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
KRTAP4-3Q9BYR4 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
KRTAP4-3Q9BYR4 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
KRTAP4-3Q9BYR4 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC5.51□□□□□ -1.53
KRTAP4-3Q9BYR4 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
KRTAP4-3Q9BYR4 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
KRTAP4-3Q9BYR4 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC5.51□□□□□ -1.53
KRTAP4-3Q9BYR4 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
KRTAP4-3Q9BYR4 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
KRTAP4-3Q9BYR4 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC5.51□□□□□ -1.53
KRTAP4-3Q9BYR4 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC5.51□□□□□ -1.53
KRTAP4-3Q9BYR4 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC5.51□□□□□ -1.53
KRTAP4-3Q9BYR4 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC5.51□□□□□ -1.53
KRTAP4-3Q9BYR4 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
KRTAP4-3Q9BYR4 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
KRTAP4-3Q9BYR4 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
KRTAP4-3Q9BYR4 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
KRTAP4-3Q9BYR4 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC5.51□□□□□ -1.53
KRTAP4-3Q9BYR4 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
KRTAP4-3Q9BYR4 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
KRTAP4-3Q9BYR4 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC5.51□□□□□ -1.53
KRTAP4-3Q9BYR4 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
KRTAP4-3Q9BYR4 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC5.51□□□□□ -1.53
KRTAP4-3Q9BYR4 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
KRTAP4-3Q9BYR4 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
KRTAP4-3Q9BYR4 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
KRTAP4-3Q9BYR4 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
KRTAP4-3Q9BYR4 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
KRTAP4-3Q9BYR4 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
KRTAP4-3Q9BYR4 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
KRTAP4-3Q9BYR4 CETN4P-206ENST00000642099 2168 ntBASIC5.51□□□□□ -1.53
KRTAP4-3Q9BYR4 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC5.51□□□□□ -1.53
KRTAP4-3Q9BYR4 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
KRTAP4-3Q9BYR4 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC5.51□□□□□ -1.53
KRTAP4-3Q9BYR4 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
KRTAP4-3Q9BYR4 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
KRTAP4-3Q9BYR4 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
KRTAP4-3Q9BYR4 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
KRTAP4-3Q9BYR4 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC5.51□□□□□ -1.53
KRTAP4-3Q9BYR4 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
KRTAP4-3Q9BYR4 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC5.51□□□□□ -1.53
KRTAP4-3Q9BYR4 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC5.51□□□□□ -1.53
KRTAP4-3Q9BYR4 DGCR5-201ENST00000399539 862 ntBASIC5.51□□□□□ -1.53
KRTAP4-3Q9BYR4 AC098850.1-201ENST00000419919 790 ntBASIC5.51□□□□□ -1.53
KRTAP4-3Q9BYR4 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC5.51□□□□□ -1.53
KRTAP4-3Q9BYR4 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC5.51□□□□□ -1.53
KRTAP4-3Q9BYR4 AL353705.2-201ENST00000428243 662 ntBASIC5.51□□□□□ -1.53
KRTAP4-3Q9BYR4 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
KRTAP4-3Q9BYR4 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
KRTAP4-3Q9BYR4 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC5.51□□□□□ -1.53
KRTAP4-3Q9BYR4 CRB3P1-201ENST00000449338 276 ntBASIC5.51□□□□□ -1.53
KRTAP4-3Q9BYR4 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
KRTAP4-3Q9BYR4 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
KRTAP4-3Q9BYR4 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC5.51□□□□□ -1.53
KRTAP4-3Q9BYR4 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC5.51□□□□□ -1.53
KRTAP4-3Q9BYR4 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
KRTAP4-3Q9BYR4 AC135586.1-201ENST00000539323 574 ntBASIC5.51□□□□□ -1.53
KRTAP4-3Q9BYR4 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC5.51□□□□□ -1.53
KRTAP4-3Q9BYR4 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC5.51□□□□□ -1.53
KRTAP4-3Q9BYR4 CDK4-206ENST00000549606 558 ntTSL 2 BASIC5.51□□□□□ -1.53
KRTAP4-3Q9BYR4 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC5.51□□□□□ -1.53
KRTAP4-3Q9BYR4 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC5.51□□□□□ -1.53
KRTAP4-3Q9BYR4 NAA38-207ENST00000576861 556 ntTSL 3 BASIC5.51□□□□□ -1.53
KRTAP4-3Q9BYR4 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC5.51□□□□□ -1.53
KRTAP4-3Q9BYR4 SSH2-210ENST00000582084 560 ntTSL 3 BASIC5.51□□□□□ -1.53
KRTAP4-3Q9BYR4 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
KRTAP4-3Q9BYR4 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC5.51□□□□□ -1.53
KRTAP4-3Q9BYR4 AC004233.3-201ENST00000607794 1269 ntBASIC5.51□□□□□ -1.53
KRTAP4-3Q9BYR4 AC012645.4-201ENST00000610691 1061 ntBASIC5.51□□□□□ -1.53
KRTAP4-3Q9BYR4 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC5.51□□□□□ -1.53
KRTAP4-3Q9BYR4 AL662799.1-202ENST00000614205 422 ntBASIC5.51□□□□□ -1.53
KRTAP4-3Q9BYR4 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
KRTAP4-3Q9BYR4 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
KRTAP4-3Q9BYR4 GPER1-207ENST00000619052 571 ntTSL 2 BASIC5.51□□□□□ -1.53
KRTAP4-3Q9BYR4 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
KRTAP4-3Q9BYR4 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
KRTAP4-3Q9BYR4 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
KRTAP4-3Q9BYR4 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC5.51□□□□□ -1.53
KRTAP4-3Q9BYR4 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
KRTAP4-3Q9BYR4 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
KRTAP4-3Q9BYR4 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC5.51□□□□□ -1.53
KRTAP4-3Q9BYR4 AC132872.4-202ENST00000622924 2756 ntBASIC5.51□□□□□ -1.53
KRTAP4-3Q9BYR4 HCG11-201ENST00000411553 5696 ntBASIC5.51□□□□□ -1.53
KRTAP4-3Q9BYR4 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
KRTAP4-3Q9BYR4 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC5.51□□□□□ -1.53
KRTAP4-3Q9BYR4 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC5.51□□□□□ -1.53
KRTAP4-3Q9BYR4 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
KRTAP4-3Q9BYR4 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC5.51□□□□□ -1.53
KRTAP4-3Q9BYR4 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
KRTAP4-3Q9BYR4 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
KRTAP4-3Q9BYR4 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC5.51□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms