Protein–RNA interactions for Protein: Q99616

CCL13, C-C motif chemokine 13, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13Q99616 AC098859.1-201ENST00000502915 1238 ntBASIC13.65□□□□□ -0.22
CCL13Q99616 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC13.65□□□□□ -0.22
CCL13Q99616 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC13.65□□□□□ -0.22
CCL13Q99616 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC13.65□□□□□ -0.22
CCL13Q99616 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC13.65□□□□□ -0.22
CCL13Q99616 METTL23-205ENST00000588302 925 ntTSL 5 BASIC13.65□□□□□ -0.22
CCL13Q99616 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC13.65□□□□□ -0.22
CCL13Q99616 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
CCL13Q99616 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CCL13Q99616 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC13.65□□□□□ -0.22
CCL13Q99616 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
CCL13Q99616 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CCL13Q99616 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CCL13Q99616 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CCL13Q99616 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CCL13Q99616 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
CCL13Q99616 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC13.65□□□□□ -0.23
CCL13Q99616 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
CCL13Q99616 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC13.64□□□□□ -0.23
CCL13Q99616 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CCL13Q99616 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CCL13Q99616 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
CCL13Q99616 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC13.64□□□□□ -0.23
CCL13Q99616 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
CCL13Q99616 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC13.64□□□□□ -0.23
CCL13Q99616 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
CCL13Q99616 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CCL13Q99616 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CCL13Q99616 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CCL13Q99616 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CCL13Q99616 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
CCL13Q99616 AC006449.6-201ENST00000612330 2296 ntBASIC13.64□□□□□ -0.23
CCL13Q99616 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC13.64□□□□□ -0.23
CCL13Q99616 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CCL13Q99616 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CCL13Q99616 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CCL13Q99616 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CCL13Q99616 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
CCL13Q99616 GOLGA6L17P-202ENST00000614358 1398 ntBASIC13.64□□□□□ -0.23
CCL13Q99616 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CCL13Q99616 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CCL13Q99616 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC13.64□□□□□ -0.23
CCL13Q99616 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC13.64□□□□□ -0.23
CCL13Q99616 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC13.64□□□□□ -0.23
CCL13Q99616 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC13.64□□□□□ -0.23
CCL13Q99616 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC13.64□□□□□ -0.23
CCL13Q99616 RBPMS2P1-201ENST00000437762 623 ntBASIC13.64□□□□□ -0.23
CCL13Q99616 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CCL13Q99616 AC023141.5-201ENST00000458585 616 ntBASIC13.64□□□□□ -0.23
CCL13Q99616 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC13.64□□□□□ -0.23
CCL13Q99616 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CCL13Q99616 AC027612.4-201ENST00000605371 583 ntBASIC13.64□□□□□ -0.23
CCL13Q99616 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC13.64□□□□□ -0.23
CCL13Q99616 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CCL13Q99616 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC13.64□□□□□ -0.23
CCL13Q99616 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CCL13Q99616 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CCL13Q99616 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CCL13Q99616 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC13.64□□□□□ -0.23
CCL13Q99616 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC13.64□□□□□ -0.23
CCL13Q99616 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC13.64□□□□□ -0.23
CCL13Q99616 AL592424.1-201ENST00000563624 1536 ntBASIC13.64□□□□□ -0.23
CCL13Q99616 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
CCL13Q99616 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CCL13Q99616 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC13.64□□□□□ -0.23
CCL13Q99616 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC13.64□□□□□ -0.23
CCL13Q99616 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC13.63□□□□□ -0.23
CCL13Q99616 ING5-213ENST00000636051 4199 ntTSL 5 BASIC13.63□□□□□ -0.23
CCL13Q99616 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CCL13Q99616 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
CCL13Q99616 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CCL13Q99616 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC13.63□□□□□ -0.23
CCL13Q99616 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CCL13Q99616 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CCL13Q99616 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
CCL13Q99616 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC13.63□□□□□ -0.23
CCL13Q99616 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC13.63□□□□□ -0.23
CCL13Q99616 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CCL13Q99616 RNA5SP410-201ENST00000516285 106 ntBASIC13.63□□□□□ -0.23
CCL13Q99616 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC13.63□□□□□ -0.23
CCL13Q99616 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC13.63□□□□□ -0.23
CCL13Q99616 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC13.63□□□□□ -0.23
CCL13Q99616 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC13.63□□□□□ -0.23
CCL13Q99616 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC13.63□□□□□ -0.23
CCL13Q99616 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
CCL13Q99616 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC13.63□□□□□ -0.23
CCL13Q99616 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC13.63□□□□□ -0.23
CCL13Q99616 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC13.63□□□□□ -0.23
CCL13Q99616 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC13.63□□□□□ -0.23
CCL13Q99616 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CCL13Q99616 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
CCL13Q99616 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
CCL13Q99616 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CCL13Q99616 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
CCL13Q99616 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CCL13Q99616 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
CCL13Q99616 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CCL13Q99616 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CCL13Q99616 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
CCL13Q99616 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC13.62□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms