Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
RAB40CQ96S21 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC13.26□□□□□ -0.29
RAB40CQ96S21 ABCD1P5-201ENST00000445663 754 ntBASIC13.26□□□□□ -0.29
RAB40CQ96S21 PAWRP1-201ENST00000451083 565 ntBASIC13.26□□□□□ -0.29
RAB40CQ96S21 PRYP5-201ENST00000451909 266 ntBASIC13.26□□□□□ -0.29
RAB40CQ96S21 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RAB40CQ96S21 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC13.26□□□□□ -0.29
RAB40CQ96S21 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC13.26□□□□□ -0.29
RAB40CQ96S21 CDV3-207ENST00000508481 661 ntTSL 3 BASIC13.26□□□□□ -0.29
RAB40CQ96S21 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC13.26□□□□□ -0.29
RAB40CQ96S21 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC13.26□□□□□ -0.29
RAB40CQ96S21 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC13.26□□□□□ -0.29
RAB40CQ96S21 TPM1-226ENST00000560959 925 ntTSL 2 BASIC13.26□□□□□ -0.29
RAB40CQ96S21 AL109954.1-202ENST00000564051 2148 ntBASIC13.26□□□□□ -0.29
RAB40CQ96S21 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC13.26□□□□□ -0.29
RAB40CQ96S21 AC233702.3-201ENST00000578656 1387 ntBASIC13.26□□□□□ -0.29
RAB40CQ96S21 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RAB40CQ96S21 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
RAB40CQ96S21 AC091076.1-201ENST00000610741 619 ntBASIC13.26□□□□□ -0.29
RAB40CQ96S21 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RAB40CQ96S21 AC114341.1-201ENST00000618070 349 ntBASIC13.26□□□□□ -0.29
RAB40CQ96S21 AC016734.2-201ENST00000624325 1377 ntBASIC13.26□□□□□ -0.29
RAB40CQ96S21 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
RAB40CQ96S21 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RAB40CQ96S21 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC13.26□□□□□ -0.29
RAB40CQ96S21 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RAB40CQ96S21 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RAB40CQ96S21 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
RAB40CQ96S21 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RAB40CQ96S21 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
RAB40CQ96S21 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RAB40CQ96S21 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
RAB40CQ96S21 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
RAB40CQ96S21 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC13.25□□□□□ -0.29
RAB40CQ96S21 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
RAB40CQ96S21 AC136621.1-201ENST00000624017 2304 ntBASIC13.25□□□□□ -0.29
RAB40CQ96S21 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC13.25□□□□□ -0.29
RAB40CQ96S21 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC13.25□□□□□ -0.29
RAB40CQ96S21 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC13.25□□□□□ -0.29
RAB40CQ96S21 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
RAB40CQ96S21 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RAB40CQ96S21 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC13.25□□□□□ -0.29
RAB40CQ96S21 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
RAB40CQ96S21 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RAB40CQ96S21 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RAB40CQ96S21 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
RAB40CQ96S21 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC13.25□□□□□ -0.29
RAB40CQ96S21 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RAB40CQ96S21 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC13.25□□□□□ -0.29
RAB40CQ96S21 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
RAB40CQ96S21 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
RAB40CQ96S21 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC13.25□□□□□ -0.29
RAB40CQ96S21 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
RAB40CQ96S21 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RAB40CQ96S21 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RAB40CQ96S21 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
RAB40CQ96S21 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
RAB40CQ96S21 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC13.25□□□□□ -0.29
RAB40CQ96S21 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
RAB40CQ96S21 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC13.25□□□□□ -0.29
RAB40CQ96S21 RNF146-204ENST00000476956 884 ntTSL 2 BASIC13.25□□□□□ -0.29
RAB40CQ96S21 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC13.25□□□□□ -0.29
RAB40CQ96S21 RPS15-207ENST00000591032 550 ntTSL 3 BASIC13.25□□□□□ -0.29
RAB40CQ96S21 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
RAB40CQ96S21 RPS15-212ENST00000593052 629 ntTSL 2 BASIC13.25□□□□□ -0.29
RAB40CQ96S21 BNIP3P18-201ENST00000593976 575 ntBASIC13.25□□□□□ -0.29
RAB40CQ96S21 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
RAB40CQ96S21 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
RAB40CQ96S21 REXO1L3P-201ENST00000622202 1288 ntBASIC13.25□□□□□ -0.29
RAB40CQ96S21 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
RAB40CQ96S21 GOLGA8DP-202ENST00000341390 2184 ntBASIC13.25□□□□□ -0.29
RAB40CQ96S21 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RAB40CQ96S21 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RAB40CQ96S21 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC13.25□□□□□ -0.29
RAB40CQ96S21 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RAB40CQ96S21 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
RAB40CQ96S21 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RAB40CQ96S21 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RAB40CQ96S21 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC13.25□□□□□ -0.29
RAB40CQ96S21 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
RAB40CQ96S21 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC13.24□□□□□ -0.29
RAB40CQ96S21 LOX-206ENST00000639739 1626 ntTSL 5 BASIC13.24□□□□□ -0.29
RAB40CQ96S21 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
RAB40CQ96S21 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC13.24□□□□□ -0.29
RAB40CQ96S21 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC13.24□□□□□ -0.29
RAB40CQ96S21 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC13.24□□□□□ -0.29
RAB40CQ96S21 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
RAB40CQ96S21 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
RAB40CQ96S21 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
RAB40CQ96S21 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC13.24□□□□□ -0.29
RAB40CQ96S21 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
RAB40CQ96S21 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
RAB40CQ96S21 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC13.24□□□□□ -0.29
RAB40CQ96S21 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
RAB40CQ96S21 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
RAB40CQ96S21 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
RAB40CQ96S21 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC13.24□□□□□ -0.29
RAB40CQ96S21 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
RAB40CQ96S21 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
RAB40CQ96S21 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms