Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC15.39■□□□□ 0.05
NR1H4Q96RI1 GXYLT1P4-201ENST00000613576 1192 ntBASIC15.39■□□□□ 0.05
NR1H4Q96RI1 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC15.39■□□□□ 0.05
NR1H4Q96RI1 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
NR1H4Q96RI1 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NR1H4Q96RI1 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
NR1H4Q96RI1 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NR1H4Q96RI1 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
NR1H4Q96RI1 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
NR1H4Q96RI1 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
NR1H4Q96RI1 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
NR1H4Q96RI1 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NR1H4Q96RI1 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC15.39■□□□□ 0.05
NR1H4Q96RI1 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NR1H4Q96RI1 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
NR1H4Q96RI1 FGD5P1-202ENST00000614866 2498 ntBASIC15.39■□□□□ 0.05
NR1H4Q96RI1 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NR1H4Q96RI1 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NR1H4Q96RI1 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC15.39■□□□□ 0.05
NR1H4Q96RI1 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
NR1H4Q96RI1 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NR1H4Q96RI1 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC15.39■□□□□ 0.05
NR1H4Q96RI1 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
NR1H4Q96RI1 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NR1H4Q96RI1 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
NR1H4Q96RI1 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
NR1H4Q96RI1 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
NR1H4Q96RI1 AC007686.3-201ENST00000619017 3487 ntBASIC15.38■□□□□ 0.05
NR1H4Q96RI1 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
NR1H4Q96RI1 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
NR1H4Q96RI1 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
NR1H4Q96RI1 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC15.38■□□□□ 0.05
NR1H4Q96RI1 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
NR1H4Q96RI1 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
NR1H4Q96RI1 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC15.38■□□□□ 0.05
NR1H4Q96RI1 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
NR1H4Q96RI1 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
NR1H4Q96RI1 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
NR1H4Q96RI1 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
NR1H4Q96RI1 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
NR1H4Q96RI1 TSPY12P-201ENST00000421279 868 ntBASIC15.38■□□□□ 0.05
NR1H4Q96RI1 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
NR1H4Q96RI1 AC009947.2-201ENST00000444014 672 ntBASIC15.38■□□□□ 0.05
NR1H4Q96RI1 ECEL1P2-202ENST00000465689 757 ntBASIC15.38■□□□□ 0.05
NR1H4Q96RI1 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
NR1H4Q96RI1 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
NR1H4Q96RI1 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
NR1H4Q96RI1 MIR3917-201ENST00000580971 93 ntBASIC15.38■□□□□ 0.05
NR1H4Q96RI1 MIR4497-201ENST00000583208 89 ntBASIC15.38■□□□□ 0.05
NR1H4Q96RI1 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC15.38■□□□□ 0.05
NR1H4Q96RI1 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC15.38■□□□□ 0.05
NR1H4Q96RI1 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
NR1H4Q96RI1 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
NR1H4Q96RI1 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC15.38■□□□□ 0.05
NR1H4Q96RI1 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
NR1H4Q96RI1 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC15.38■□□□□ 0.05
NR1H4Q96RI1 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC15.38■□□□□ 0.05
NR1H4Q96RI1 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
NR1H4Q96RI1 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
NR1H4Q96RI1 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
NR1H4Q96RI1 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
NR1H4Q96RI1 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
NR1H4Q96RI1 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
NR1H4Q96RI1 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC15.38■□□□□ 0.05
NR1H4Q96RI1 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
NR1H4Q96RI1 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
NR1H4Q96RI1 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC15.38■□□□□ 0.05
NR1H4Q96RI1 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC15.37■□□□□ 0.05
NR1H4Q96RI1 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
NR1H4Q96RI1 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
NR1H4Q96RI1 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
NR1H4Q96RI1 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
NR1H4Q96RI1 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC15.37■□□□□ 0.05
NR1H4Q96RI1 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC15.37■□□□□ 0.05
NR1H4Q96RI1 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
NR1H4Q96RI1 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
NR1H4Q96RI1 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC15.37■□□□□ 0.05
NR1H4Q96RI1 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC15.37■□□□□ 0.05
NR1H4Q96RI1 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
NR1H4Q96RI1 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC15.37■□□□□ 0.05
NR1H4Q96RI1 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
NR1H4Q96RI1 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
NR1H4Q96RI1 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC15.37■□□□□ 0.05
NR1H4Q96RI1 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC15.37■□□□□ 0.05
NR1H4Q96RI1 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC15.37■□□□□ 0.05
NR1H4Q96RI1 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
NR1H4Q96RI1 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC15.37■□□□□ 0.05
NR1H4Q96RI1 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC15.37■□□□□ 0.05
NR1H4Q96RI1 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
NR1H4Q96RI1 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC15.37■□□□□ 0.05
NR1H4Q96RI1 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC15.37■□□□□ 0.05
NR1H4Q96RI1 PGM5P2-202ENST00000637225 1043 ntBASIC15.37■□□□□ 0.05
NR1H4Q96RI1 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC15.37■□□□□ 0.05
NR1H4Q96RI1 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
NR1H4Q96RI1 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
NR1H4Q96RI1 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
NR1H4Q96RI1 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
NR1H4Q96RI1 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
NR1H4Q96RI1 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
NR1H4Q96RI1 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC15.37■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms