Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC13.51□□□□□ -0.25
GAFA1Q96PS6 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
GAFA1Q96PS6 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
GAFA1Q96PS6 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
GAFA1Q96PS6 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
GAFA1Q96PS6 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
GAFA1Q96PS6 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
GAFA1Q96PS6 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
GAFA1Q96PS6 AL139400.1-201ENST00000366220 510 ntBASIC13.51□□□□□ -0.25
GAFA1Q96PS6 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
GAFA1Q96PS6 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
GAFA1Q96PS6 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC13.51□□□□□ -0.25
GAFA1Q96PS6 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC13.51□□□□□ -0.25
GAFA1Q96PS6 AC109322.1-201ENST00000524499 1264 ntBASIC13.51□□□□□ -0.25
GAFA1Q96PS6 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC13.51□□□□□ -0.25
GAFA1Q96PS6 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC13.51□□□□□ -0.25
GAFA1Q96PS6 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC13.51□□□□□ -0.25
GAFA1Q96PS6 MAX-210ENST00000555419 765 ntTSL 5 BASIC13.51□□□□□ -0.25
GAFA1Q96PS6 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
GAFA1Q96PS6 AP001059.3-201ENST00000619053 235 ntBASIC13.51□□□□□ -0.25
GAFA1Q96PS6 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC13.51□□□□□ -0.25
GAFA1Q96PS6 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
GAFA1Q96PS6 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
GAFA1Q96PS6 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
GAFA1Q96PS6 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
GAFA1Q96PS6 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
GAFA1Q96PS6 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC13.51□□□□□ -0.25
GAFA1Q96PS6 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
GAFA1Q96PS6 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
GAFA1Q96PS6 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
GAFA1Q96PS6 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
GAFA1Q96PS6 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
GAFA1Q96PS6 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
GAFA1Q96PS6 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
GAFA1Q96PS6 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC13.51□□□□□ -0.25
GAFA1Q96PS6 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC13.5□□□□□ -0.25
GAFA1Q96PS6 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC13.5□□□□□ -0.25
GAFA1Q96PS6 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC13.5□□□□□ -0.25
GAFA1Q96PS6 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
GAFA1Q96PS6 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC13.5□□□□□ -0.25
GAFA1Q96PS6 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
GAFA1Q96PS6 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
GAFA1Q96PS6 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
GAFA1Q96PS6 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC13.5□□□□□ -0.25
GAFA1Q96PS6 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC13.5□□□□□ -0.25
GAFA1Q96PS6 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC13.5□□□□□ -0.25
GAFA1Q96PS6 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
GAFA1Q96PS6 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
GAFA1Q96PS6 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
GAFA1Q96PS6 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
GAFA1Q96PS6 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
GAFA1Q96PS6 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
GAFA1Q96PS6 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC13.5□□□□□ -0.25
GAFA1Q96PS6 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC13.5□□□□□ -0.25
GAFA1Q96PS6 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC13.5□□□□□ -0.25
GAFA1Q96PS6 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
GAFA1Q96PS6 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
GAFA1Q96PS6 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
GAFA1Q96PS6 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
GAFA1Q96PS6 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
GAFA1Q96PS6 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC13.5□□□□□ -0.25
GAFA1Q96PS6 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
GAFA1Q96PS6 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC13.5□□□□□ -0.25
GAFA1Q96PS6 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC13.5□□□□□ -0.25
GAFA1Q96PS6 HLA-J-203ENST00000494367 1087 ntBASIC13.5□□□□□ -0.25
GAFA1Q96PS6 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC13.5□□□□□ -0.25
GAFA1Q96PS6 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
GAFA1Q96PS6 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC13.5□□□□□ -0.25
GAFA1Q96PS6 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
GAFA1Q96PS6 PAM16-215ENST00000577031 548 ntTSL 4 BASIC13.5□□□□□ -0.25
GAFA1Q96PS6 AC018529.1-201ENST00000613063 361 ntBASIC13.5□□□□□ -0.25
GAFA1Q96PS6 MIR6080-201ENST00000617359 66 ntBASIC13.5□□□□□ -0.25
GAFA1Q96PS6 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
GAFA1Q96PS6 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
GAFA1Q96PS6 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
GAFA1Q96PS6 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
GAFA1Q96PS6 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC13.5□□□□□ -0.25
GAFA1Q96PS6 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
GAFA1Q96PS6 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
GAFA1Q96PS6 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC13.5□□□□□ -0.25
GAFA1Q96PS6 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC13.5□□□□□ -0.25
GAFA1Q96PS6 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC13.5□□□□□ -0.25
GAFA1Q96PS6 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
GAFA1Q96PS6 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC13.5□□□□□ -0.25
GAFA1Q96PS6 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC13.5□□□□□ -0.25
GAFA1Q96PS6 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC13.5□□□□□ -0.25
GAFA1Q96PS6 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
GAFA1Q96PS6 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
GAFA1Q96PS6 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
GAFA1Q96PS6 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC13.49□□□□□ -0.25
GAFA1Q96PS6 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
GAFA1Q96PS6 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
GAFA1Q96PS6 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC13.49□□□□□ -0.25
GAFA1Q96PS6 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC13.49□□□□□ -0.25
GAFA1Q96PS6 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
GAFA1Q96PS6 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
GAFA1Q96PS6 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC13.49□□□□□ -0.25
GAFA1Q96PS6 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
GAFA1Q96PS6 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
GAFA1Q96PS6 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms