Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC12.39□□□□□ -0.43
AP1S3Q96PC3 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
AP1S3Q96PC3 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
AP1S3Q96PC3 ZNF407-201ENST00000299687 7948 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
AP1S3Q96PC3 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
AP1S3Q96PC3 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC12.38□□□□□ -0.43
AP1S3Q96PC3 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
AP1S3Q96PC3 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC12.38□□□□□ -0.43
AP1S3Q96PC3 SEZ6L-203ENST00000360929 6307 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
AP1S3Q96PC3 TNC-212ENST00000542877 5517 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
AP1S3Q96PC3 RTL10-202ENST00000405640 6785 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
AP1S3Q96PC3 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
AP1S3Q96PC3 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
AP1S3Q96PC3 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC12.38□□□□□ -0.43
AP1S3Q96PC3 PPP4R3B-205ENST00000616288 4310 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
AP1S3Q96PC3 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC12.38□□□□□ -0.43
AP1S3Q96PC3 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
AP1S3Q96PC3 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC12.38□□□□□ -0.43
AP1S3Q96PC3 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
AP1S3Q96PC3 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC12.38□□□□□ -0.43
AP1S3Q96PC3 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
AP1S3Q96PC3 IGFN1-201ENST00000295591 4439 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
AP1S3Q96PC3 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
AP1S3Q96PC3 MYLK-204ENST00000360304 7738 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
AP1S3Q96PC3 LRPAP1-202ENST00000500728 7819 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
AP1S3Q96PC3 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC12.38□□□□□ -0.43
AP1S3Q96PC3 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
AP1S3Q96PC3 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC12.38□□□□□ -0.43
AP1S3Q96PC3 BX664615.1-201ENST00000443558 458 ntBASIC12.38□□□□□ -0.43
AP1S3Q96PC3 YBX1P2-201ENST00000489612 999 ntBASIC12.38□□□□□ -0.43
AP1S3Q96PC3 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
AP1S3Q96PC3 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC12.38□□□□□ -0.43
AP1S3Q96PC3 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC12.38□□□□□ -0.43
AP1S3Q96PC3 CD320-202ENST00000537716 1119 ntTSL 2 BASIC12.38□□□□□ -0.43
AP1S3Q96PC3 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC12.38□□□□□ -0.43
AP1S3Q96PC3 NFAT5-209ENST00000567239 6376 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
AP1S3Q96PC3 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC12.38□□□□□ -0.43
AP1S3Q96PC3 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
AP1S3Q96PC3 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
AP1S3Q96PC3 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC12.38□□□□□ -0.43
AP1S3Q96PC3 AC011558.1-201ENST00000623459 338 ntBASIC12.38□□□□□ -0.43
AP1S3Q96PC3 AC073912.3-201ENST00000624414 853 ntBASIC12.38□□□□□ -0.43
AP1S3Q96PC3 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC12.38□□□□□ -0.43
AP1S3Q96PC3 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
AP1S3Q96PC3 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
AP1S3Q96PC3 EIF4G1-219ENST00000435046 4668 ntTSL 5 BASIC12.38□□□□□ -0.43
AP1S3Q96PC3 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
AP1S3Q96PC3 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
AP1S3Q96PC3 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
AP1S3Q96PC3 XPO7-201ENST00000252512 4861 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
AP1S3Q96PC3 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC12.38□□□□□ -0.43
AP1S3Q96PC3 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
AP1S3Q96PC3 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
AP1S3Q96PC3 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC12.38□□□□□ -0.43
AP1S3Q96PC3 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
AP1S3Q96PC3 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
AP1S3Q96PC3 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
AP1S3Q96PC3 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC12.38□□□□□ -0.43
AP1S3Q96PC3 AC006058.4-201ENST00000624016 1670 ntBASIC12.38□□□□□ -0.43
AP1S3Q96PC3 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
AP1S3Q96PC3 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC12.38□□□□□ -0.43
AP1S3Q96PC3 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
AP1S3Q96PC3 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
AP1S3Q96PC3 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
AP1S3Q96PC3 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC12.37□□□□□ -0.43
AP1S3Q96PC3 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC12.37□□□□□ -0.43
AP1S3Q96PC3 FAM155A-201ENST00000375915 8503 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
AP1S3Q96PC3 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC12.37□□□□□ -0.43
AP1S3Q96PC3 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC12.37□□□□□ -0.43
AP1S3Q96PC3 BAIAP3-201ENST00000324385 4678 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
AP1S3Q96PC3 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC12.37□□□□□ -0.43
AP1S3Q96PC3 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
AP1S3Q96PC3 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
AP1S3Q96PC3 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC12.37□□□□□ -0.43
AP1S3Q96PC3 PDGFRB-201ENST00000261799 5717 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
AP1S3Q96PC3 ZIK1-204ENST00000597850 4181 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
AP1S3Q96PC3 POTEI-201ENST00000451531 7020 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
AP1S3Q96PC3 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
AP1S3Q96PC3 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
AP1S3Q96PC3 COLGALT1-201ENST00000252599 3704 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
AP1S3Q96PC3 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC12.37□□□□□ -0.43
AP1S3Q96PC3 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
AP1S3Q96PC3 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
AP1S3Q96PC3 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
AP1S3Q96PC3 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
AP1S3Q96PC3 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC12.37□□□□□ -0.43
AP1S3Q96PC3 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
AP1S3Q96PC3 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
AP1S3Q96PC3 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
AP1S3Q96PC3 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
AP1S3Q96PC3 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC12.37□□□□□ -0.43
AP1S3Q96PC3 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC12.37□□□□□ -0.43
AP1S3Q96PC3 HLA-J-202ENST00000469281 1241 ntBASIC12.37□□□□□ -0.43
AP1S3Q96PC3 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC12.37□□□□□ -0.43
AP1S3Q96PC3 VENTXP5-201ENST00000523979 775 ntBASIC12.37□□□□□ -0.43
AP1S3Q96PC3 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC12.37□□□□□ -0.43
AP1S3Q96PC3 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC12.37□□□□□ -0.43
AP1S3Q96PC3 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC12.37□□□□□ -0.43
AP1S3Q96PC3 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC12.37□□□□□ -0.43
AP1S3Q96PC3 WDR6-223ENST00000627177 207 ntTSL 2 BASIC12.37□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms