Protein–RNA interactions for Protein: Q96L92

SNX27, Sorting nexin-27, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27Q96L92 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC17.49■□□□□ 0.39
SNX27Q96L92 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC17.49■□□□□ 0.39
SNX27Q96L92 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC17.49■□□□□ 0.39
SNX27Q96L92 RN7SL692P-201ENST00000464677 288 ntBASIC17.49■□□□□ 0.39
SNX27Q96L92 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SNX27Q96L92 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC17.49■□□□□ 0.39
SNX27Q96L92 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC17.49■□□□□ 0.39
SNX27Q96L92 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
SNX27Q96L92 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SNX27Q96L92 KRT8P12-202ENST00000472924 1397 ntBASIC17.49■□□□□ 0.39
SNX27Q96L92 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
SNX27Q96L92 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC17.49■□□□□ 0.39
SNX27Q96L92 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
SNX27Q96L92 CYP4F24P-201ENST00000586049 1580 ntBASIC17.49■□□□□ 0.39
SNX27Q96L92 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SNX27Q96L92 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC17.48■□□□□ 0.39
SNX27Q96L92 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC17.48■□□□□ 0.39
SNX27Q96L92 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
SNX27Q96L92 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC17.48■□□□□ 0.39
SNX27Q96L92 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC17.48■□□□□ 0.39
SNX27Q96L92 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SNX27Q96L92 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SNX27Q96L92 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SNX27Q96L92 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SNX27Q96L92 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SNX27Q96L92 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SNX27Q96L92 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SNX27Q96L92 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
SNX27Q96L92 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC17.48■□□□□ 0.39
SNX27Q96L92 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC17.48■□□□□ 0.39
SNX27Q96L92 HILS1-202ENST00000545329 423 ntBASIC17.48■□□□□ 0.39
SNX27Q96L92 AL512361.1-201ENST00000554200 418 ntBASIC17.48■□□□□ 0.39
SNX27Q96L92 RN7SL190P-201ENST00000582519 257 ntBASIC17.48■□□□□ 0.39
SNX27Q96L92 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC17.48■□□□□ 0.39
SNX27Q96L92 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC17.48■□□□□ 0.39
SNX27Q96L92 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC17.48■□□□□ 0.39
SNX27Q96L92 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SNX27Q96L92 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SNX27Q96L92 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC17.48■□□□□ 0.39
SNX27Q96L92 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC17.48■□□□□ 0.39
SNX27Q96L92 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC17.48■□□□□ 0.39
SNX27Q96L92 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SNX27Q96L92 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC17.48■□□□□ 0.39
SNX27Q96L92 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SNX27Q96L92 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SNX27Q96L92 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
SNX27Q96L92 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC17.48■□□□□ 0.39
SNX27Q96L92 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SNX27Q96L92 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
SNX27Q96L92 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
SNX27Q96L92 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC17.47■□□□□ 0.39
SNX27Q96L92 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SNX27Q96L92 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC17.47■□□□□ 0.39
SNX27Q96L92 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SNX27Q96L92 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SNX27Q96L92 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
SNX27Q96L92 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SNX27Q96L92 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC17.47■□□□□ 0.39
SNX27Q96L92 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SNX27Q96L92 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SNX27Q96L92 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SNX27Q96L92 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC17.47■□□□□ 0.39
SNX27Q96L92 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC17.47■□□□□ 0.39
SNX27Q96L92 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SNX27Q96L92 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SNX27Q96L92 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SNX27Q96L92 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC17.47■□□□□ 0.39
SNX27Q96L92 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC17.47■□□□□ 0.39
SNX27Q96L92 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
SNX27Q96L92 AC092933.1-201ENST00000393644 945 ntBASIC17.47■□□□□ 0.39
SNX27Q96L92 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC17.47■□□□□ 0.39
SNX27Q96L92 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SNX27Q96L92 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SNX27Q96L92 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SNX27Q96L92 AC010336.2-201ENST00000564226 506 ntBASIC17.47■□□□□ 0.39
SNX27Q96L92 COQ9-214ENST00000567933 882 ntTSL 3 BASIC17.47■□□□□ 0.39
SNX27Q96L92 AC009407.1-201ENST00000568958 598 ntBASIC17.47■□□□□ 0.39
SNX27Q96L92 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC17.47■□□□□ 0.39
SNX27Q96L92 AC017083.2-201ENST00000608069 979 ntBASIC17.47■□□□□ 0.39
SNX27Q96L92 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC17.47■□□□□ 0.39
SNX27Q96L92 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC17.47■□□□□ 0.39
SNX27Q96L92 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SNX27Q96L92 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SNX27Q96L92 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SNX27Q96L92 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
SNX27Q96L92 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SNX27Q96L92 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC17.47■□□□□ 0.39
SNX27Q96L92 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC17.47■□□□□ 0.39
SNX27Q96L92 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SNX27Q96L92 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC17.47■□□□□ 0.39
SNX27Q96L92 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
SNX27Q96L92 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC17.46■□□□□ 0.39
SNX27Q96L92 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
SNX27Q96L92 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC17.46■□□□□ 0.39
SNX27Q96L92 PCDHA14-201ENST00000506751 2298 ntBASIC17.46■□□□□ 0.39
SNX27Q96L92 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
SNX27Q96L92 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC17.46■□□□□ 0.39
SNX27Q96L92 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SNX27Q96L92 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
SNX27Q96L92 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC17.46■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms