Protein–RNA interactions for Protein: Q96L08

SUSD3, Sushi domain-containing protein 3, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUSD3Q96L08 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SUSD3Q96L08 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SUSD3Q96L08 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SUSD3Q96L08 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC17.11■□□□□ 0.33
SUSD3Q96L08 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SUSD3Q96L08 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC17.11■□□□□ 0.33
SUSD3Q96L08 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC17.11■□□□□ 0.33
SUSD3Q96L08 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC17.11■□□□□ 0.33
SUSD3Q96L08 AP001282.1-201ENST00000531301 1499 ntBASIC17.11■□□□□ 0.33
SUSD3Q96L08 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SUSD3Q96L08 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
SUSD3Q96L08 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SUSD3Q96L08 Z97205.2-201ENST00000564697 1639 ntBASIC17.1■□□□□ 0.33
SUSD3Q96L08 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SUSD3Q96L08 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SUSD3Q96L08 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SUSD3Q96L08 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SUSD3Q96L08 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SUSD3Q96L08 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
SUSD3Q96L08 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC17.1■□□□□ 0.33
SUSD3Q96L08 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SUSD3Q96L08 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
SUSD3Q96L08 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SUSD3Q96L08 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SUSD3Q96L08 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC17.1■□□□□ 0.33
SUSD3Q96L08 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
SUSD3Q96L08 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SUSD3Q96L08 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC17.1■□□□□ 0.33
SUSD3Q96L08 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC17.1■□□□□ 0.33
SUSD3Q96L08 AL589987.1-201ENST00000453380 819 ntBASIC17.1■□□□□ 0.33
SUSD3Q96L08 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC17.1■□□□□ 0.33
SUSD3Q96L08 CR383656.12-201ENST00000549567 513 ntBASIC17.1■□□□□ 0.33
SUSD3Q96L08 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC17.1■□□□□ 0.33
SUSD3Q96L08 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SUSD3Q96L08 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
SUSD3Q96L08 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC17.1■□□□□ 0.33
SUSD3Q96L08 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SUSD3Q96L08 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SUSD3Q96L08 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
SUSD3Q96L08 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC17.1■□□□□ 0.33
SUSD3Q96L08 SLC7A15P-201ENST00000424028 1363 ntBASIC17.1■□□□□ 0.33
SUSD3Q96L08 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SUSD3Q96L08 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SUSD3Q96L08 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC17.1■□□□□ 0.33
SUSD3Q96L08 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SUSD3Q96L08 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
SUSD3Q96L08 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SUSD3Q96L08 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SUSD3Q96L08 ZBTB45P2-201ENST00000452245 1531 ntBASIC17.1■□□□□ 0.33
SUSD3Q96L08 NKILA-202ENST00000614771 2598 ntBASIC17.1■□□□□ 0.33
SUSD3Q96L08 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SUSD3Q96L08 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SUSD3Q96L08 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SUSD3Q96L08 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SUSD3Q96L08 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
SUSD3Q96L08 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SUSD3Q96L08 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SUSD3Q96L08 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SUSD3Q96L08 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SUSD3Q96L08 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SUSD3Q96L08 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SUSD3Q96L08 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SUSD3Q96L08 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
SUSD3Q96L08 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
SUSD3Q96L08 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SUSD3Q96L08 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC17.09■□□□□ 0.33
SUSD3Q96L08 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
SUSD3Q96L08 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SUSD3Q96L08 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SUSD3Q96L08 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SUSD3Q96L08 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
SUSD3Q96L08 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SUSD3Q96L08 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SUSD3Q96L08 HAUS4P1-201ENST00000406739 1145 ntBASIC17.09■□□□□ 0.33
SUSD3Q96L08 MEP1AP4-201ENST00000423244 1087 ntBASIC17.09■□□□□ 0.33
SUSD3Q96L08 NME2P1-201ENST00000426182 414 ntBASIC17.09■□□□□ 0.33
SUSD3Q96L08 WBP2-203ENST00000433525 928 ntTSL 2 BASIC17.09■□□□□ 0.33
SUSD3Q96L08 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC17.09■□□□□ 0.33
SUSD3Q96L08 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC17.09■□□□□ 0.33
SUSD3Q96L08 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC17.09■□□□□ 0.33
SUSD3Q96L08 AC055876.2-201ENST00000531834 546 ntBASIC17.09■□□□□ 0.33
SUSD3Q96L08 TPRX2P-201ENST00000535362 881 ntBASIC17.09■□□□□ 0.33
SUSD3Q96L08 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC17.09■□□□□ 0.33
SUSD3Q96L08 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC17.09■□□□□ 0.33
SUSD3Q96L08 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SUSD3Q96L08 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC17.09■□□□□ 0.33
SUSD3Q96L08 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC17.09■□□□□ 0.33
SUSD3Q96L08 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC17.09■□□□□ 0.33
SUSD3Q96L08 SRP9-204ENST00000619790 377 ntTSL 2 BASIC17.09■□□□□ 0.33
SUSD3Q96L08 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC17.09■□□□□ 0.33
SUSD3Q96L08 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC17.09■□□□□ 0.33
SUSD3Q96L08 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SUSD3Q96L08 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SUSD3Q96L08 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SUSD3Q96L08 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SUSD3Q96L08 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SUSD3Q96L08 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SUSD3Q96L08 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SUSD3Q96L08 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SUSD3Q96L08 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 68.8 ms