Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TRIM11Q96F44 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TRIM11Q96F44 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
TRIM11Q96F44 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRIM11Q96F44 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRIM11Q96F44 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRIM11Q96F44 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRIM11Q96F44 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC17.22■□□□□ 0.35
TRIM11Q96F44 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC17.22■□□□□ 0.35
TRIM11Q96F44 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRIM11Q96F44 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRIM11Q96F44 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRIM11Q96F44 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRIM11Q96F44 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRIM11Q96F44 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRIM11Q96F44 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC17.22■□□□□ 0.35
TRIM11Q96F44 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
TRIM11Q96F44 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRIM11Q96F44 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC17.22■□□□□ 0.35
TRIM11Q96F44 FDX1P1-201ENST00000449115 551 ntBASIC17.22■□□□□ 0.35
TRIM11Q96F44 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
TRIM11Q96F44 AP002472.1-201ENST00000577490 586 ntBASIC17.22■□□□□ 0.35
TRIM11Q96F44 MIR4321-201ENST00000592276 80 ntBASIC17.22■□□□□ 0.35
TRIM11Q96F44 FHL2-212ENST00000607522 759 ntTSL 2 BASIC17.22■□□□□ 0.35
TRIM11Q96F44 AC027601.4-201ENST00000611259 610 ntBASIC17.22■□□□□ 0.35
TRIM11Q96F44 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRIM11Q96F44 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
TRIM11Q96F44 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
TRIM11Q96F44 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TRIM11Q96F44 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC17.22■□□□□ 0.35
TRIM11Q96F44 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC17.22■□□□□ 0.35
TRIM11Q96F44 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRIM11Q96F44 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC17.22■□□□□ 0.35
TRIM11Q96F44 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TRIM11Q96F44 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRIM11Q96F44 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRIM11Q96F44 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
TRIM11Q96F44 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC17.21■□□□□ 0.35
TRIM11Q96F44 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRIM11Q96F44 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRIM11Q96F44 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
TRIM11Q96F44 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRIM11Q96F44 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRIM11Q96F44 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC17.21■□□□□ 0.35
TRIM11Q96F44 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRIM11Q96F44 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRIM11Q96F44 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
TRIM11Q96F44 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRIM11Q96F44 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
TRIM11Q96F44 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRIM11Q96F44 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TRIM11Q96F44 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
TRIM11Q96F44 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRIM11Q96F44 MED15P5-201ENST00000423150 992 ntBASIC17.21■□□□□ 0.35
TRIM11Q96F44 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC17.21■□□□□ 0.35
TRIM11Q96F44 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TRIM11Q96F44 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRIM11Q96F44 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TRIM11Q96F44 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TRIM11Q96F44 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC17.21■□□□□ 0.35
TRIM11Q96F44 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC17.21■□□□□ 0.35
TRIM11Q96F44 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC17.21■□□□□ 0.35
TRIM11Q96F44 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC17.21■□□□□ 0.35
TRIM11Q96F44 FAM197Y3-203ENST00000618346 717 ntBASIC17.21■□□□□ 0.35
TRIM11Q96F44 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRIM11Q96F44 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
TRIM11Q96F44 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRIM11Q96F44 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
TRIM11Q96F44 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
TRIM11Q96F44 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRIM11Q96F44 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC17.21■□□□□ 0.35
TRIM11Q96F44 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TRIM11Q96F44 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.34
TRIM11Q96F44 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
TRIM11Q96F44 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC17.21■□□□□ 0.34
TRIM11Q96F44 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
TRIM11Q96F44 VILL-207ENST00000465644 1857 ntTSL 5 BASIC17.2■□□□□ 0.34
TRIM11Q96F44 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC17.2■□□□□ 0.34
TRIM11Q96F44 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TRIM11Q96F44 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRIM11Q96F44 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRIM11Q96F44 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC17.2■□□□□ 0.34
TRIM11Q96F44 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRIM11Q96F44 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TRIM11Q96F44 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TRIM11Q96F44 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRIM11Q96F44 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRIM11Q96F44 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC17.2■□□□□ 0.34
TRIM11Q96F44 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRIM11Q96F44 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
TRIM11Q96F44 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRIM11Q96F44 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRIM11Q96F44 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRIM11Q96F44 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC17.2■□□□□ 0.34
TRIM11Q96F44 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC17.2■□□□□ 0.34
TRIM11Q96F44 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC17.2■□□□□ 0.34
TRIM11Q96F44 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC17.2■□□□□ 0.34
TRIM11Q96F44 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC17.2■□□□□ 0.34
TRIM11Q96F44 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC17.2■□□□□ 0.34
TRIM11Q96F44 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 62.9 ms