Protein–RNA interactions for Protein: Q969K3

RNF34, E3 ubiquitin-protein ligase RNF34, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF34Q969K3 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RNF34Q969K3 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC17.05■□□□□ 0.32
RNF34Q969K3 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC17.05■□□□□ 0.32
RNF34Q969K3 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC17.05■□□□□ 0.32
RNF34Q969K3 METTL23-205ENST00000588302 925 ntTSL 5 BASIC17.05■□□□□ 0.32
RNF34Q969K3 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC17.05■□□□□ 0.32
RNF34Q969K3 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC17.05■□□□□ 0.32
RNF34Q969K3 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC17.05■□□□□ 0.32
RNF34Q969K3 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC17.05■□□□□ 0.32
RNF34Q969K3 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
RNF34Q969K3 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
RNF34Q969K3 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
RNF34Q969K3 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
RNF34Q969K3 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC17.05■□□□□ 0.32
RNF34Q969K3 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RNF34Q969K3 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
RNF34Q969K3 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RNF34Q969K3 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC17.05■□□□□ 0.32
RNF34Q969K3 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC17.05■□□□□ 0.32
RNF34Q969K3 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RNF34Q969K3 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
RNF34Q969K3 NORAD-201ENST00000565493 5339 ntBASIC17.05■□□□□ 0.32
RNF34Q969K3 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC17.05■□□□□ 0.32
RNF34Q969K3 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RNF34Q969K3 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC17.04■□□□□ 0.32
RNF34Q969K3 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RNF34Q969K3 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RNF34Q969K3 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
RNF34Q969K3 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC17.04■□□□□ 0.32
RNF34Q969K3 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RNF34Q969K3 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RNF34Q969K3 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RNF34Q969K3 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RNF34Q969K3 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RNF34Q969K3 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RNF34Q969K3 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RNF34Q969K3 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
RNF34Q969K3 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC17.04■□□□□ 0.32
RNF34Q969K3 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
RNF34Q969K3 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC17.04■□□□□ 0.32
RNF34Q969K3 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC17.04■□□□□ 0.32
RNF34Q969K3 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC17.04■□□□□ 0.32
RNF34Q969K3 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RNF34Q969K3 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC17.04■□□□□ 0.32
RNF34Q969K3 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC17.04■□□□□ 0.32
RNF34Q969K3 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC17.04■□□□□ 0.32
RNF34Q969K3 AC073389.1-201ENST00000595595 795 ntBASIC17.04■□□□□ 0.32
RNF34Q969K3 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC17.04■□□□□ 0.32
RNF34Q969K3 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC17.04■□□□□ 0.32
RNF34Q969K3 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RNF34Q969K3 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
RNF34Q969K3 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
RNF34Q969K3 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RNF34Q969K3 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RNF34Q969K3 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
RNF34Q969K3 PCDH8P1-201ENST00000428983 2773 ntBASIC17.04■□□□□ 0.32
RNF34Q969K3 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
RNF34Q969K3 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC17.04■□□□□ 0.32
RNF34Q969K3 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RNF34Q969K3 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RNF34Q969K3 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC17.04■□□□□ 0.32
RNF34Q969K3 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RNF34Q969K3 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
RNF34Q969K3 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
RNF34Q969K3 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RNF34Q969K3 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
RNF34Q969K3 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
RNF34Q969K3 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RNF34Q969K3 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RNF34Q969K3 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
RNF34Q969K3 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
RNF34Q969K3 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RNF34Q969K3 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC17.03■□□□□ 0.32
RNF34Q969K3 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC17.03■□□□□ 0.32
RNF34Q969K3 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RNF34Q969K3 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC17.03■□□□□ 0.32
RNF34Q969K3 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RNF34Q969K3 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC17.03■□□□□ 0.32
RNF34Q969K3 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RNF34Q969K3 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RNF34Q969K3 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
RNF34Q969K3 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
RNF34Q969K3 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RNF34Q969K3 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RNF34Q969K3 MIR346-201ENST00000362234 95 ntBASIC17.03■□□□□ 0.32
RNF34Q969K3 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC17.03■□□□□ 0.32
RNF34Q969K3 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC17.03■□□□□ 0.32
RNF34Q969K3 FAM58DP-201ENST00000428076 619 ntBASIC17.03■□□□□ 0.32
RNF34Q969K3 RBPMS2P1-201ENST00000437762 623 ntBASIC17.03■□□□□ 0.32
RNF34Q969K3 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RNF34Q969K3 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
RNF34Q969K3 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RNF34Q969K3 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC17.03■□□□□ 0.32
RNF34Q969K3 AC098859.1-201ENST00000502915 1238 ntBASIC17.03■□□□□ 0.32
RNF34Q969K3 AC093520.2-201ENST00000561830 333 ntBASIC17.03■□□□□ 0.32
RNF34Q969K3 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC17.03■□□□□ 0.32
RNF34Q969K3 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC17.03■□□□□ 0.32
RNF34Q969K3 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RNF34Q969K3 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
RNF34Q969K3 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms