Protein–RNA interactions for Protein: Q92738

USP6NL, USP6 N-terminal-like protein, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NLQ92738 AL442647.2-201ENST00000429864 857 ntBASIC18.29■□□□□ 0.52
USP6NLQ92738 ACTG1P3-201ENST00000431775 1114 ntBASIC18.29■□□□□ 0.52
USP6NLQ92738 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
USP6NLQ92738 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC18.29■□□□□ 0.52
USP6NLQ92738 FXR1-221ENST00000491674 365 ntTSL 2 BASIC18.29■□□□□ 0.52
USP6NLQ92738 HNRNPA1P13-201ENST00000510646 963 ntBASIC18.29■□□□□ 0.52
USP6NLQ92738 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC18.29■□□□□ 0.52
USP6NLQ92738 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
USP6NLQ92738 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC18.29■□□□□ 0.52
USP6NLQ92738 AC084346.2-201ENST00000607097 949 ntBASIC18.29■□□□□ 0.52
USP6NLQ92738 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
USP6NLQ92738 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
USP6NLQ92738 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC18.29■□□□□ 0.52
USP6NLQ92738 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
USP6NLQ92738 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC18.29■□□□□ 0.52
USP6NLQ92738 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
USP6NLQ92738 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
USP6NLQ92738 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
USP6NLQ92738 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC18.29■□□□□ 0.52
USP6NLQ92738 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
USP6NLQ92738 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
USP6NLQ92738 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
USP6NLQ92738 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
USP6NLQ92738 AL133338.1-201ENST00000565695 1517 ntBASIC18.28■□□□□ 0.52
USP6NLQ92738 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
USP6NLQ92738 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
USP6NLQ92738 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
USP6NLQ92738 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
USP6NLQ92738 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
USP6NLQ92738 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
USP6NLQ92738 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC18.28■□□□□ 0.52
USP6NLQ92738 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC18.28■□□□□ 0.52
USP6NLQ92738 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
USP6NLQ92738 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
USP6NLQ92738 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC18.28■□□□□ 0.52
USP6NLQ92738 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
USP6NLQ92738 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
USP6NLQ92738 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
USP6NLQ92738 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
USP6NLQ92738 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC18.28■□□□□ 0.52
USP6NLQ92738 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC18.28■□□□□ 0.52
USP6NLQ92738 RPL13P2-201ENST00000440687 659 ntBASIC18.28■□□□□ 0.52
USP6NLQ92738 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC18.28■□□□□ 0.52
USP6NLQ92738 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC18.28■□□□□ 0.52
USP6NLQ92738 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC18.28■□□□□ 0.52
USP6NLQ92738 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC18.28■□□□□ 0.52
USP6NLQ92738 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
USP6NLQ92738 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC18.28■□□□□ 0.52
USP6NLQ92738 MIR5189-201ENST00000577370 114 ntBASIC18.28■□□□□ 0.52
USP6NLQ92738 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
USP6NLQ92738 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC18.28■□□□□ 0.52
USP6NLQ92738 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
USP6NLQ92738 TECR-220ENST00000600083 1204 ntTSL 2 BASIC18.28■□□□□ 0.52
USP6NLQ92738 AL365330.1-201ENST00000607459 531 ntBASIC18.28■□□□□ 0.52
USP6NLQ92738 MIR6787-201ENST00000616675 61 ntBASIC18.28■□□□□ 0.52
USP6NLQ92738 AL158212.4-201ENST00000624062 1286 ntBASIC18.28■□□□□ 0.52
USP6NLQ92738 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
USP6NLQ92738 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
USP6NLQ92738 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC18.28■□□□□ 0.52
USP6NLQ92738 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
USP6NLQ92738 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
USP6NLQ92738 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
USP6NLQ92738 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC18.28■□□□□ 0.52
USP6NLQ92738 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
USP6NLQ92738 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
USP6NLQ92738 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
USP6NLQ92738 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
USP6NLQ92738 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
USP6NLQ92738 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
USP6NLQ92738 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
USP6NLQ92738 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC18.27■□□□□ 0.52
USP6NLQ92738 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
USP6NLQ92738 AMT-206ENST00000458307 1860 ntTSL 2 BASIC18.27■□□□□ 0.52
USP6NLQ92738 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
USP6NLQ92738 AC006538.1-201ENST00000567905 1585 ntBASIC18.27■□□□□ 0.52
USP6NLQ92738 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
USP6NLQ92738 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
USP6NLQ92738 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
USP6NLQ92738 AC099336.1-201ENST00000417053 1171 ntBASIC18.27■□□□□ 0.52
USP6NLQ92738 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
USP6NLQ92738 EEF1DP4-201ENST00000446006 880 ntBASIC18.27■□□□□ 0.52
USP6NLQ92738 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
USP6NLQ92738 CTBP2P5-201ENST00000454986 1264 ntBASIC18.27■□□□□ 0.52
USP6NLQ92738 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC18.27■□□□□ 0.52
USP6NLQ92738 USB1-203ENST00000539737 1212 ntTSL 2 BASIC18.27■□□□□ 0.52
USP6NLQ92738 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
USP6NLQ92738 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC18.27■□□□□ 0.52
USP6NLQ92738 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC18.27■□□□□ 0.52
USP6NLQ92738 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC18.27■□□□□ 0.52
USP6NLQ92738 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
USP6NLQ92738 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC18.27■□□□□ 0.52
USP6NLQ92738 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
USP6NLQ92738 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC18.27■□□□□ 0.51
USP6NLQ92738 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
USP6NLQ92738 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
USP6NLQ92738 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
USP6NLQ92738 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
USP6NLQ92738 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
USP6NLQ92738 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
USP6NLQ92738 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms