Protein–RNA interactions for Protein: Q8TBC4

UBA3, NEDD8-activating enzyme E1 catalytic subunit, humanhuman

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3Q8TBC4 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
UBA3Q8TBC4 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC17.22■□□□□ 0.35
UBA3Q8TBC4 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC17.22■□□□□ 0.35
UBA3Q8TBC4 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
UBA3Q8TBC4 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
UBA3Q8TBC4 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
UBA3Q8TBC4 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
UBA3Q8TBC4 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC17.22■□□□□ 0.35
UBA3Q8TBC4 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
UBA3Q8TBC4 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
UBA3Q8TBC4 TNRC18P3-201ENST00000441896 2691 ntBASIC17.22■□□□□ 0.35
UBA3Q8TBC4 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
UBA3Q8TBC4 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC17.22■□□□□ 0.35
UBA3Q8TBC4 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC17.22■□□□□ 0.35
UBA3Q8TBC4 FAM220BP-201ENST00000377689 816 ntBASIC17.22■□□□□ 0.35
UBA3Q8TBC4 HLA-H-201ENST00000383620 1096 ntBASIC17.22■□□□□ 0.35
UBA3Q8TBC4 TSEN15P1-201ENST00000423257 515 ntBASIC17.22■□□□□ 0.35
UBA3Q8TBC4 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC17.22■□□□□ 0.35
UBA3Q8TBC4 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC17.22■□□□□ 0.35
UBA3Q8TBC4 SPDYE14P-201ENST00000442619 822 ntBASIC17.22■□□□□ 0.35
UBA3Q8TBC4 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC17.22■□□□□ 0.35
UBA3Q8TBC4 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC17.22■□□□□ 0.35
UBA3Q8TBC4 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC17.22■□□□□ 0.35
UBA3Q8TBC4 LINC00628-201ENST00000628516 1289 ntBASIC17.22■□□□□ 0.35
UBA3Q8TBC4 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC17.22■□□□□ 0.35
UBA3Q8TBC4 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC17.22■□□□□ 0.35
UBA3Q8TBC4 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
UBA3Q8TBC4 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
UBA3Q8TBC4 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC17.22■□□□□ 0.35
UBA3Q8TBC4 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC17.22■□□□□ 0.35
UBA3Q8TBC4 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC17.22■□□□□ 0.35
UBA3Q8TBC4 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
UBA3Q8TBC4 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
UBA3Q8TBC4 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
UBA3Q8TBC4 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
UBA3Q8TBC4 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC17.22■□□□□ 0.35
UBA3Q8TBC4 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC17.21■□□□□ 0.35
UBA3Q8TBC4 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
UBA3Q8TBC4 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
UBA3Q8TBC4 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
UBA3Q8TBC4 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
UBA3Q8TBC4 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
UBA3Q8TBC4 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
UBA3Q8TBC4 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
UBA3Q8TBC4 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
UBA3Q8TBC4 AC018695.7-201ENST00000624587 2492 ntBASIC17.21■□□□□ 0.35
UBA3Q8TBC4 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
UBA3Q8TBC4 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC17.21■□□□□ 0.35
UBA3Q8TBC4 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC17.21■□□□□ 0.35
UBA3Q8TBC4 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
UBA3Q8TBC4 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC17.21■□□□□ 0.35
UBA3Q8TBC4 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
UBA3Q8TBC4 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
UBA3Q8TBC4 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
UBA3Q8TBC4 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC17.21■□□□□ 0.35
UBA3Q8TBC4 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC17.21■□□□□ 0.35
UBA3Q8TBC4 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
UBA3Q8TBC4 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC17.21■□□□□ 0.35
UBA3Q8TBC4 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC17.21■□□□□ 0.35
UBA3Q8TBC4 GATD1-206ENST00000526325 756 ntTSL 5 BASIC17.21■□□□□ 0.35
UBA3Q8TBC4 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
UBA3Q8TBC4 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC17.21■□□□□ 0.35
UBA3Q8TBC4 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
UBA3Q8TBC4 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC17.21■□□□□ 0.35
UBA3Q8TBC4 AC061975.2-201ENST00000581722 295 ntBASIC17.21■□□□□ 0.35
UBA3Q8TBC4 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
UBA3Q8TBC4 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC17.21■□□□□ 0.35
UBA3Q8TBC4 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
UBA3Q8TBC4 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
UBA3Q8TBC4 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
UBA3Q8TBC4 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC17.21■□□□□ 0.35
UBA3Q8TBC4 AL391005.1-201ENST00000623953 2435 ntBASIC17.21■□□□□ 0.35
UBA3Q8TBC4 BLK-205ENST00000529894 2017 ntTSL 5 BASIC17.21■□□□□ 0.35
UBA3Q8TBC4 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
UBA3Q8TBC4 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
UBA3Q8TBC4 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
UBA3Q8TBC4 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
UBA3Q8TBC4 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC17.21■□□□□ 0.34
UBA3Q8TBC4 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC17.2■□□□□ 0.34
UBA3Q8TBC4 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
UBA3Q8TBC4 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC17.2■□□□□ 0.34
UBA3Q8TBC4 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
UBA3Q8TBC4 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
UBA3Q8TBC4 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
UBA3Q8TBC4 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
UBA3Q8TBC4 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
UBA3Q8TBC4 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC17.2■□□□□ 0.34
UBA3Q8TBC4 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
UBA3Q8TBC4 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
UBA3Q8TBC4 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
UBA3Q8TBC4 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
UBA3Q8TBC4 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
UBA3Q8TBC4 RPL30-202ENST00000396070 440 ntTSL 2 BASIC17.2■□□□□ 0.34
UBA3Q8TBC4 LBH-203ENST00000404397 543 ntTSL 4 BASIC17.2■□□□□ 0.34
UBA3Q8TBC4 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC17.2■□□□□ 0.34
UBA3Q8TBC4 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC17.2■□□□□ 0.34
UBA3Q8TBC4 HLA-J-203ENST00000494367 1087 ntBASIC17.2■□□□□ 0.34
UBA3Q8TBC4 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC17.2■□□□□ 0.34
UBA3Q8TBC4 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC17.2■□□□□ 0.34
UBA3Q8TBC4 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms