Protein–RNA interactions for Protein: Q8NDV3

SMC1B, Structural maintenance of chromosomes protein 1B, humanhuman

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1BQ8NDV3 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC19.13■□□□□ 0.65
SMC1BQ8NDV3 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC19.13■□□□□ 0.65
SMC1BQ8NDV3 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SMC1BQ8NDV3 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC19.13■□□□□ 0.65
SMC1BQ8NDV3 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC19.13■□□□□ 0.65
SMC1BQ8NDV3 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
SMC1BQ8NDV3 METTL26-214ENST00000614890 801 ntTSL 3 BASIC19.13■□□□□ 0.65
SMC1BQ8NDV3 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC19.13■□□□□ 0.65
SMC1BQ8NDV3 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SMC1BQ8NDV3 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SMC1BQ8NDV3 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC19.13■□□□□ 0.65
SMC1BQ8NDV3 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
SMC1BQ8NDV3 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
SMC1BQ8NDV3 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SMC1BQ8NDV3 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC19.13■□□□□ 0.65
SMC1BQ8NDV3 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SMC1BQ8NDV3 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC19.13■□□□□ 0.65
SMC1BQ8NDV3 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
SMC1BQ8NDV3 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SMC1BQ8NDV3 AC018470.1-201ENST00000624790 3129 ntBASIC19.13■□□□□ 0.65
SMC1BQ8NDV3 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC19.13■□□□□ 0.65
SMC1BQ8NDV3 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
SMC1BQ8NDV3 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SMC1BQ8NDV3 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SMC1BQ8NDV3 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
SMC1BQ8NDV3 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
SMC1BQ8NDV3 AC108860.2-201ENST00000562760 2183 ntBASIC19.12■□□□□ 0.65
SMC1BQ8NDV3 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC19.12■□□□□ 0.65
SMC1BQ8NDV3 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC19.12■□□□□ 0.65
SMC1BQ8NDV3 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SMC1BQ8NDV3 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SMC1BQ8NDV3 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SMC1BQ8NDV3 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC19.12■□□□□ 0.65
SMC1BQ8NDV3 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC19.12■□□□□ 0.65
SMC1BQ8NDV3 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
SMC1BQ8NDV3 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
SMC1BQ8NDV3 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SMC1BQ8NDV3 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SMC1BQ8NDV3 TCL1B-201ENST00000340722 1166 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SMC1BQ8NDV3 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SMC1BQ8NDV3 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SMC1BQ8NDV3 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC19.12■□□□□ 0.65
SMC1BQ8NDV3 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC19.12■□□□□ 0.65
SMC1BQ8NDV3 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
SMC1BQ8NDV3 GNRHR2-203ENST00000581100 1187 ntBASIC19.12■□□□□ 0.65
SMC1BQ8NDV3 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC19.12■□□□□ 0.65
SMC1BQ8NDV3 DNAJC17-212ENST00000627802 428 ntTSL 4 BASIC19.12■□□□□ 0.65
SMC1BQ8NDV3 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
SMC1BQ8NDV3 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC19.12■□□□□ 0.65
SMC1BQ8NDV3 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SMC1BQ8NDV3 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC19.12■□□□□ 0.65
SMC1BQ8NDV3 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
SMC1BQ8NDV3 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC19.12■□□□□ 0.65
SMC1BQ8NDV3 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SMC1BQ8NDV3 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
SMC1BQ8NDV3 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SMC1BQ8NDV3 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
SMC1BQ8NDV3 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
SMC1BQ8NDV3 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC19.11■□□□□ 0.65
SMC1BQ8NDV3 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SMC1BQ8NDV3 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SMC1BQ8NDV3 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC19.11■□□□□ 0.65
SMC1BQ8NDV3 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC19.11■□□□□ 0.65
SMC1BQ8NDV3 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SMC1BQ8NDV3 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SMC1BQ8NDV3 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SMC1BQ8NDV3 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
SMC1BQ8NDV3 PTPA-218ENST00000435132 618 ntTSL 2 BASIC19.11■□□□□ 0.65
SMC1BQ8NDV3 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC19.11■□□□□ 0.65
SMC1BQ8NDV3 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC19.11■□□□□ 0.65
SMC1BQ8NDV3 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC19.11■□□□□ 0.65
SMC1BQ8NDV3 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC19.11■□□□□ 0.65
SMC1BQ8NDV3 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC19.11■□□□□ 0.65
SMC1BQ8NDV3 AC120045.2-201ENST00000567334 178 ntBASIC19.11■□□□□ 0.65
SMC1BQ8NDV3 CCDC197-205ENST00000636493 1279 ntAPPRIS P5 TSL 5 BASIC19.11■□□□□ 0.65
SMC1BQ8NDV3 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SMC1BQ8NDV3 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SMC1BQ8NDV3 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC19.11■□□□□ 0.65
SMC1BQ8NDV3 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC19.11■□□□□ 0.65
SMC1BQ8NDV3 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
SMC1BQ8NDV3 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SMC1BQ8NDV3 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SMC1BQ8NDV3 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
SMC1BQ8NDV3 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
SMC1BQ8NDV3 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC19.11■□□□□ 0.65
SMC1BQ8NDV3 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC19.11■□□□□ 0.65
SMC1BQ8NDV3 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SMC1BQ8NDV3 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
SMC1BQ8NDV3 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SMC1BQ8NDV3 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC19.1■□□□□ 0.65
SMC1BQ8NDV3 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC19.1■□□□□ 0.65
SMC1BQ8NDV3 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SMC1BQ8NDV3 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
SMC1BQ8NDV3 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
SMC1BQ8NDV3 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC19.1■□□□□ 0.65
SMC1BQ8NDV3 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SMC1BQ8NDV3 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SMC1BQ8NDV3 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SMC1BQ8NDV3 AC006001.1-201ENST00000325130 474 ntBASIC19.1■□□□□ 0.65
SMC1BQ8NDV3 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms