Protein–RNA interactions for Protein: Q8N8U3

RTL3, Retrotransposon Gag-like protein 3, humanhuman

Known RBP Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL3Q8N8U3 DOC2GP-204ENST00000639052 2548 ntBASIC16.66■□□□□ 0.26
RTL3Q8N8U3 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC16.66■□□□□ 0.26
RTL3Q8N8U3 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RTL3Q8N8U3 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC16.66■□□□□ 0.26
RTL3Q8N8U3 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
RTL3Q8N8U3 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC16.66■□□□□ 0.26
RTL3Q8N8U3 BANP-204ENST00000393208 2283 ntTSL 2 BASIC16.66■□□□□ 0.26
RTL3Q8N8U3 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RTL3Q8N8U3 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
RTL3Q8N8U3 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RTL3Q8N8U3 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
RTL3Q8N8U3 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
RTL3Q8N8U3 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
RTL3Q8N8U3 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RTL3Q8N8U3 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
RTL3Q8N8U3 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RTL3Q8N8U3 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RTL3Q8N8U3 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RTL3Q8N8U3 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC16.66■□□□□ 0.26
RTL3Q8N8U3 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
RTL3Q8N8U3 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC16.66■□□□□ 0.26
RTL3Q8N8U3 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC16.66■□□□□ 0.26
RTL3Q8N8U3 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
RTL3Q8N8U3 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC16.66■□□□□ 0.26
RTL3Q8N8U3 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
RTL3Q8N8U3 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC16.66■□□□□ 0.26
RTL3Q8N8U3 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC16.66■□□□□ 0.26
RTL3Q8N8U3 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RTL3Q8N8U3 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RTL3Q8N8U3 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RTL3Q8N8U3 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RTL3Q8N8U3 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
RTL3Q8N8U3 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RTL3Q8N8U3 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
RTL3Q8N8U3 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
RTL3Q8N8U3 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC16.65■□□□□ 0.26
RTL3Q8N8U3 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RTL3Q8N8U3 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
RTL3Q8N8U3 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RTL3Q8N8U3 PGR-209ENST00000617858 2816 ntTSL 5 BASIC16.65■□□□□ 0.26
RTL3Q8N8U3 AL513523.2-202ENST00000427283 2040 ntBASIC16.65■□□□□ 0.26
RTL3Q8N8U3 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
RTL3Q8N8U3 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RTL3Q8N8U3 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
RTL3Q8N8U3 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RTL3Q8N8U3 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
RTL3Q8N8U3 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
RTL3Q8N8U3 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
RTL3Q8N8U3 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RTL3Q8N8U3 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
RTL3Q8N8U3 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
RTL3Q8N8U3 SPDYE7P-202ENST00000420373 878 ntBASIC16.65■□□□□ 0.26
RTL3Q8N8U3 AL353705.2-201ENST00000428243 662 ntBASIC16.65■□□□□ 0.26
RTL3Q8N8U3 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC16.65■□□□□ 0.26
RTL3Q8N8U3 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RTL3Q8N8U3 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC16.65■□□□□ 0.26
RTL3Q8N8U3 AC069262.1-201ENST00000539058 672 ntBASIC16.65■□□□□ 0.26
RTL3Q8N8U3 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RTL3Q8N8U3 MIR6080-201ENST00000617359 66 ntBASIC16.65■□□□□ 0.26
RTL3Q8N8U3 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RTL3Q8N8U3 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
RTL3Q8N8U3 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
RTL3Q8N8U3 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RTL3Q8N8U3 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RTL3Q8N8U3 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RTL3Q8N8U3 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC16.65■□□□□ 0.26
RTL3Q8N8U3 KRT18P28-201ENST00000453838 1332 ntBASIC16.65■□□□□ 0.26
RTL3Q8N8U3 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
RTL3Q8N8U3 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RTL3Q8N8U3 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
RTL3Q8N8U3 AL391005.1-201ENST00000623953 2435 ntBASIC16.65■□□□□ 0.26
RTL3Q8N8U3 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
RTL3Q8N8U3 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RTL3Q8N8U3 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
RTL3Q8N8U3 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RTL3Q8N8U3 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RTL3Q8N8U3 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC16.65■□□□□ 0.26
RTL3Q8N8U3 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC16.65■□□□□ 0.26
RTL3Q8N8U3 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
RTL3Q8N8U3 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC16.64■□□□□ 0.25
RTL3Q8N8U3 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RTL3Q8N8U3 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RTL3Q8N8U3 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC16.64■□□□□ 0.25
RTL3Q8N8U3 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
RTL3Q8N8U3 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RTL3Q8N8U3 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
RTL3Q8N8U3 BLK-205ENST00000529894 2017 ntTSL 5 BASIC16.64■□□□□ 0.25
RTL3Q8N8U3 AC026691.1-201ENST00000602502 2017 ntBASIC16.64■□□□□ 0.25
RTL3Q8N8U3 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RTL3Q8N8U3 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RTL3Q8N8U3 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
RTL3Q8N8U3 LBH-203ENST00000404397 543 ntTSL 4 BASIC16.64■□□□□ 0.25
RTL3Q8N8U3 HAUS4P1-201ENST00000406739 1145 ntBASIC16.64■□□□□ 0.25
RTL3Q8N8U3 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC16.64■□□□□ 0.25
RTL3Q8N8U3 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC16.64■□□□□ 0.25
RTL3Q8N8U3 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC16.64■□□□□ 0.25
RTL3Q8N8U3 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RTL3Q8N8U3 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC16.64■□□□□ 0.25
RTL3Q8N8U3 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC16.64■□□□□ 0.25
RTL3Q8N8U3 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms