Protein–RNA interactions for Protein: Q8N7H5

PAF1, RNA polymerase II-associated factor 1 homolog, humanhuman

Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1Q8N7H5 AC109635.5-201ENST00000533593 962 ntBASIC16.78■□□□□ 0.28
PAF1Q8N7H5 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC16.78■□□□□ 0.28
PAF1Q8N7H5 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC16.78■□□□□ 0.28
PAF1Q8N7H5 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC16.78■□□□□ 0.28
PAF1Q8N7H5 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PAF1Q8N7H5 AC139530.3-201ENST00000620344 690 ntBASIC16.78■□□□□ 0.28
PAF1Q8N7H5 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PAF1Q8N7H5 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
PAF1Q8N7H5 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC16.78■□□□□ 0.28
PAF1Q8N7H5 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PAF1Q8N7H5 AC011676.5-201ENST00000624864 2660 ntBASIC16.78■□□□□ 0.28
PAF1Q8N7H5 AC016027.1-202ENST00000607927 1699 ntBASIC16.78■□□□□ 0.28
PAF1Q8N7H5 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
PAF1Q8N7H5 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PAF1Q8N7H5 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
PAF1Q8N7H5 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PAF1Q8N7H5 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
PAF1Q8N7H5 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PAF1Q8N7H5 AC138969.2-201ENST00000532739 9932 ntBASIC16.77■□□□□ 0.28
PAF1Q8N7H5 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PAF1Q8N7H5 AC078925.2-201ENST00000624013 1973 ntBASIC16.77■□□□□ 0.28
PAF1Q8N7H5 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PAF1Q8N7H5 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PAF1Q8N7H5 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.28
PAF1Q8N7H5 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC16.77■□□□□ 0.28
PAF1Q8N7H5 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PAF1Q8N7H5 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PAF1Q8N7H5 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC16.77■□□□□ 0.28
PAF1Q8N7H5 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
PAF1Q8N7H5 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC16.77■□□□□ 0.28
PAF1Q8N7H5 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC16.77■□□□□ 0.28
PAF1Q8N7H5 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC16.77■□□□□ 0.28
PAF1Q8N7H5 IGHV3OR16-6-201ENST00000568775 360 ntBASIC16.77■□□□□ 0.28
PAF1Q8N7H5 AC026120.1-201ENST00000611536 926 ntBASIC16.77■□□□□ 0.28
PAF1Q8N7H5 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
PAF1Q8N7H5 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC16.77■□□□□ 0.28
PAF1Q8N7H5 AL139011.1-202ENST00000642063 584 ntBASIC16.77■□□□□ 0.28
PAF1Q8N7H5 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PAF1Q8N7H5 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PAF1Q8N7H5 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC16.77■□□□□ 0.28
PAF1Q8N7H5 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC16.77■□□□□ 0.27
PAF1Q8N7H5 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
PAF1Q8N7H5 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
PAF1Q8N7H5 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.27
PAF1Q8N7H5 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC16.77■□□□□ 0.27
PAF1Q8N7H5 AC006538.1-201ENST00000567905 1585 ntBASIC16.77■□□□□ 0.27
PAF1Q8N7H5 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PAF1Q8N7H5 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
PAF1Q8N7H5 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC16.76■□□□□ 0.27
PAF1Q8N7H5 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
PAF1Q8N7H5 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PAF1Q8N7H5 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
PAF1Q8N7H5 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PAF1Q8N7H5 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PAF1Q8N7H5 AMT-206ENST00000458307 1860 ntTSL 2 BASIC16.76■□□□□ 0.27
PAF1Q8N7H5 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC16.76■□□□□ 0.27
PAF1Q8N7H5 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC16.76■□□□□ 0.27
PAF1Q8N7H5 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
PAF1Q8N7H5 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
PAF1Q8N7H5 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PAF1Q8N7H5 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PAF1Q8N7H5 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC16.76■□□□□ 0.27
PAF1Q8N7H5 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PAF1Q8N7H5 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
PAF1Q8N7H5 NKILA-202ENST00000614771 2598 ntBASIC16.76■□□□□ 0.27
PAF1Q8N7H5 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PAF1Q8N7H5 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PAF1Q8N7H5 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PAF1Q8N7H5 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC16.76■□□□□ 0.27
PAF1Q8N7H5 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PAF1Q8N7H5 TFAMP1-201ENST00000412727 736 ntBASIC16.76■□□□□ 0.27
PAF1Q8N7H5 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC16.76■□□□□ 0.27
PAF1Q8N7H5 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC16.76■□□□□ 0.27
PAF1Q8N7H5 AC005237.2-201ENST00000434368 219 ntBASIC16.76■□□□□ 0.27
PAF1Q8N7H5 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC16.76■□□□□ 0.27
PAF1Q8N7H5 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC16.76■□□□□ 0.27
PAF1Q8N7H5 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC16.76■□□□□ 0.27
PAF1Q8N7H5 PUS1-205ENST00000535067 838 ntTSL 3 BASIC16.76■□□□□ 0.27
PAF1Q8N7H5 AL135744.1-201ENST00000565098 629 ntBASIC16.76■□□□□ 0.27
PAF1Q8N7H5 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC16.76■□□□□ 0.27
PAF1Q8N7H5 MIR3909-201ENST00000579518 119 ntBASIC16.76■□□□□ 0.27
PAF1Q8N7H5 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
PAF1Q8N7H5 AC055717.3-201ENST00000622967 595 ntBASIC16.76■□□□□ 0.27
PAF1Q8N7H5 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PAF1Q8N7H5 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC16.76■□□□□ 0.27
PAF1Q8N7H5 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
PAF1Q8N7H5 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PAF1Q8N7H5 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC16.76■□□□□ 0.27
PAF1Q8N7H5 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
PAF1Q8N7H5 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PAF1Q8N7H5 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PAF1Q8N7H5 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PAF1Q8N7H5 AC084018.2-201ENST00000613093 2607 ntBASIC16.76■□□□□ 0.27
PAF1Q8N7H5 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PAF1Q8N7H5 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
PAF1Q8N7H5 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PAF1Q8N7H5 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PAF1Q8N7H5 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PAF1Q8N7H5 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC16.75■□□□□ 0.27
PAF1Q8N7H5 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms